Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1320 109 1e-18
seq1041 107 3e-18
seq1095 102 1e-16
seq738 87.8 3e-12
>seq1320
Length=267419
Score = 109 bits (120), Expect = 1e-18
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || ||||| ||||| | || | || || ||||||||||||
Sbjct 95660 ATTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCG 95601
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | || || || || ||||| || || || | | ||| || |||||
Sbjct 95600 GACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGT 95541
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| || ||||| || ||||| | || | ||| ||| || || |||| |||
Sbjct 95540 GGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCG 95481
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| ||||| || || || || || || ||||| ||||| || ||||||||
Sbjct 95480 ACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATTTT 95428
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || ||||| ||||| | || | || || ||||||||||||
Sbjct 96116 ATTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCG 96057
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | || || || || ||||| || || || | | ||| || |||||
Sbjct 96056 GACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGT 95997
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| || ||||| || ||||| | || | ||| ||| || || |||| |||
Sbjct 95996 GGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCG 95937
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| ||||| || || || || || || || || || || || ||||||
Sbjct 95936 ACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATT 95886
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || ||||| ||||| | || | || || ||||||||||||
Sbjct 96344 ATTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCG 96285
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | || || || || ||||| || || || | | ||| || |||||
Sbjct 96284 GACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGT 96225
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| || ||||| || ||||| | || | ||| ||| || || |||| |||
Sbjct 96224 GGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCG 96165
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| ||||| || || || || || || || || || || || ||||||
Sbjct 96164 ACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATT 96114
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || ||||| | || ||||| ||||| | || | || || ||||||||||||
Sbjct 95888 ATTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCG 95829
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | || || || || ||||| || || || | | ||| || |||||
Sbjct 95828 GACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGT 95769
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| || ||||| || ||||| | || | ||| ||| || || || | |||
Sbjct 95768 GGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCG 95709
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| ||||| || || || || || || || || || || || ||||||
Sbjct 95708 ACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATT 95658
Score = 93.3 bits (102), Expect = 8e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || |||||||| | || | ||| || |||||||||||||| | || | |
Sbjct 96557 CGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGACAGAGTACGACCG 96498
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || || || ||||| || || || | | ||| || ||||| || ||||| || |||
Sbjct 96497 TCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTA 96438
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || ||||| | || | ||| ||| || || || | ||| ||||| ||||| ||
Sbjct 96437 TCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACTTCAAGAGTGATG 96378
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| || || || || || || || || || ||||||
Sbjct 96377 GTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATT 96342
>seq1041
Length=325342
Score = 107 bits (118), Expect = 3e-18
Identities = 229/340 (67%), Gaps = 3/340 (1%)
Strand=Plus/Plus
Query 49909 CGATATATGCTACGAACATATTAAAGATACATTTTATTACGGATTATTCGGTAATTTTAA 49968
||| | ||| ||||| || |||||||| || |||| | || |||| || | || ||
Sbjct 170804 CGACACATGTTACGAGCACATTAAAGACACTTTTTGGAATGGTCTATTTGGAGACTTCAA 170863
Query 49969 ACTAGTAATAGATAAAAATACAGGATGTTTTAACGCTACAAAATTATGTAATTTAGGAAG 50028
||| || |||||||| |||||| | ||||| || || || || || | | ||| |
Sbjct 170864 ACTGGTCATAGATAAGGCTACAGGGTACTTTAATGCGACCAAGTTGTGCATTGAAGGTGG 170923
Query 50029 TAAGAGATATAGAAATTGGTTATCGTTAGAAAGATCAAAAGAATTGATTAAATTTATCGA 50088
|||| || ||||| | ||||||| ||| ||| | || |||||| | |
Sbjct 170924 AAAGAATTACTTTCATTGGGCAAGATTAGAAAAATCTAAAAATATGGTTAAATACTACCA 170983
Query 50089 TAAAAATAGGCGCTTAGATCACAGCGCCTATTT-TTAT--GAGATAAATGATTCGAATAA 50145
|||||||| | | || | | |||| |||| || || || ||| | || ||
Sbjct 170984 GAAAAATAGCCCTCCACATGTGGAGGGCAATTTCTTATACGAAATCAAAGATGCTAACAA 171043
Query 50146 GAATCATATTTCTAAACAAATTACCGGTCAGTACGTTCCCAAAGAGATAATACTGGACAT 50205
|| | ||| ||||||||||||||| ||| || || ||||| | ||||| || ||
Sbjct 171044 AGATAAAATTGGAAAACAAATTACCGGTACGTATGTACCTAAAGAACTGATACTTGATAT 171103
Query 50206 ATCTTCGTGGATTTCTGTAGAATTTTATTTAAAATGTAAT 50245
| | || ||||| || ||||||||||| |||||||||
Sbjct 171104 AGCCTCATGGATCTCCATAGAATTTTATGATAAATGTAAT 171143
>seq1095
Length=312686
Score = 102 bits (112), Expect = 1e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| ||||||||||| || | | ||| || || || || |||||||| || ||||| ||
Sbjct 81734 TGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATC 81675
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| |||| ||| ||||||||||| | |||||||| | ||| || || || ||
Sbjct 81674 TTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACTTCCAAAGTGATGGTCTTGCCG 81615
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || |||||||| ||||| |||||
Sbjct 81614 GTCAGAGTTTTTACGAATATCTGCAT 81589
Score = 102 bits (112), Expect = 1e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| ||||||||||| || | | ||| || || || || |||||||| || ||||| ||
Sbjct 88555 TGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATC 88496
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| |||| ||| ||||||||||| | |||||||| | ||| || || || ||
Sbjct 88495 TTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACTTCCAAAGTGATGGTCTTGCCG 88436
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || |||||||| ||||| |||||
Sbjct 88435 GTCAGAGTTTTTACGAATATCTGCAT 88410
Score = 100 bits (110), Expect = 5e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || | ||||| ||| || | || |||||||||||||| | ||||
Sbjct 78065 ATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAAATAAGTCTC 78006
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| || || || || ||||| || || ||||| || |||| |||| ||| ||| ||
Sbjct 78005 TGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTG 77946
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || | ||| || || | || || || || || || | |||||| ||||| || |||
Sbjct 77945 TCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGC 77886
Query 193359 ATTTT 193363
|||||
Sbjct 77885 ATTTT 77881
Score = 95.1 bits (104), Expect = 2e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || | ||||| ||| || | || ||||||||||| || | ||||
Sbjct 84648 ATGTTGTAGTCAGACAGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTC 84589
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| || || || || ||||| || || ||||| || |||| |||| ||| ||| ||
Sbjct 84588 TGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTG 84529
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || | ||| || || | || || || || || || | |||||| ||||| || |||
Sbjct 84528 TCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGC 84469
Query 193359 ATTTT 193363
|||||
Sbjct 84468 ATTTT 84464
>seq738
Length=407637
Score = 87.8 bits (96), Expect = 3e-12
Identities = 159/229 (69%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGT-TCTAGAATCGTC 193210
|||||||||||||| | || || |||||||| || || ||| ||| ||||| ||
Sbjct 219683 ACCAGATGCAATGTTGAATCCTTTTGTATATTATAATCC-ATTACGAATCTTGAATCTTC 219625
Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270
|||||| ||||| | ||| || | | |||||||| || || |||||||||||||
Sbjct 219624 TAATTGCTTTCCTGAAAATATGAGACGTTGTTGATCTATTGGAATACCTTCTTTATCTTT 219565
Query 193271 TATTTTGGTTTTTATATTTAAA---ATAGTATCGGAAGACTCAACTTCTAGAGTTATAGT 193327
||| | ||||| ||| | || ||||| | || | || || | || || ||
Sbjct 219564 TATATACTCTTTTA---TTAGAGCTATTGTATCAGTTGATTTAATATCAATTGTGATTGT 219508
Query 193328 TTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATTAGTAAAATAA 193376
| | || || || ||| | |||||||| ||||| || || ||||| ||
Sbjct 219507 TCTCCCAGTAAGTGTTCTAACAAATATCTGCATATTTTTTCTAAAAGAA 219459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899130823630560
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