Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq782 214 1e-50 seq1095 113 4e-20 seq4763 89.7 4e-13 >seq782 Length=394996 Score = 214 bits (236), Expect = 1e-50 Identities = 216/281 (77%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 ||||| || || |||||||| ||||||||||| || ||| | |||| ||||||| | Sbjct 342065 GGCGGATTCTTGAGTATGAACGTGTTGAGCTTGTGATTGAACTCAAGCGGGCCGTGAAAC 342124 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 ||||| || ||||||||||||| ||| || ||| || | | || || || || ||| Sbjct 342125 CCGCACGCCTTGCAGCCCTGACTGATGGTGCCCTTCTTGGTGCTAACAATCAGGTCGGTC 342184 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 || |||||||| || ||| |||| ||||||||| ||||||||| || ||||||||| Sbjct 342185 TCGGGGTTGTCGCAGCTCGGGCACAGCACAAACTTCTTGATGAAACCGTCCAGCAGGTCC 342244 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACC 34443 || | || | | ||||| || ||||| |||||||| || ||||| ||| | |||| | Sbjct 342245 TGCAGTTTGGCCGCATCGTGCGACCCGTTCACGATGAACCGGTCGTTCTTGAAGTCGAAC 342304 Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 ||||| ||||||||||| ||||| || |||||||| ||||| Sbjct 342305 TGCGTCTGCGCGCCCAGTTCGCAGCCAAAGTACTTGGTCGG 342345 Score = 123 bits (136), Expect = 2e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 ||||| || || | |||||| || | |||| ||| ||||| ||||| |||||||||||| Sbjct 349124 GCCGGCCGGCCGATCGCCTTAGCCACCTCGGCCATATTGACAATGACCGTCTTGATGCCG 349183 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || || || || || || ||||| || ||| |||||||||||||| |||||||| ||| Sbjct 349184 TTTCCTTTGCCCTCCACTTTGGCCATGAGGCGGGGCATTTTGTAGCGATAGAACGCATCC 349243 Query 34612 GCCACATTGCGGTTAACGTTCACAGT 34637 | ||| || || || |||||||| || Sbjct 349244 GACACGTTCCGCTTCACGTTCACCGT 349269 >seq1095 Length=312686 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || ||| | |||||||| ||||| ||| | ||| |||||| Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | || || ||||| ||||| || || | || || || Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || |||||||| | || || || || |||||||||| ||||| || | || ||||| Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| |||||||||||||| | ||| |||| | ||||| || || |||| Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTTCTCAGACTTCGTGGTGGAA 90690 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| ||||| || |||||| | |||||||| ||||| || | ||| || || | Sbjct 81589 ATGCAGATATTCGTAAAAACTCTGACCGGCAAGACCATCACTTTGGAAGTTGAACCATCC 81648 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | ||||| ||||| ||||| ||||| | ||| || || Sbjct 81649 GATACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 81708 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||| | ||| || || ||||| || |||| | | || | | || |||||| Sbjct 81709 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 81768 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || | ||| |||| || ||| |||| || || Sbjct 81769 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGCGTGGAGG 81815 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| ||||| || |||||| | |||||||| ||||| || | ||| || || | Sbjct 88410 ATGCAGATATTCGTAAAAACTCTGACCGGCAAGACCATCACTTTGGAAGTTGAACCATCC 88469 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | ||||| ||||| ||||| ||||| | ||| || || Sbjct 88470 GATACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 88529 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||| | ||| || || ||||| || |||| | | || | | || |||||| Sbjct 88530 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 88589 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || | ||| |||| || ||| |||| || || Sbjct 88590 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGCGTGGAGG 88636 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||||||||| || || || |||||||| ||| | ||| || ||| Sbjct 81817 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 81876 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || ||||| || || ||||| | || || || Sbjct 81877 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 81936 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | || || || || ||||| |||| |||||| | | || ||||| Sbjct 81937 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 81996 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||| || |||||||| | ||| ||||| | |||| || || |||| Sbjct 81997 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGGAA 82045 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||||||||| || || || |||||||| ||| | ||| || ||| Sbjct 88638 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 88697 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || ||||| || || ||||| | || || || Sbjct 88698 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 88757 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | || || || || ||||| |||| |||||| | | || ||||| Sbjct 88758 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 88817 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||| || |||||||| | ||| ||||| | |||| || || |||| Sbjct 88818 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGGAA 88866 >seq4763 Length=30886 Score = 89.7 bits (98), Expect = 4e-13 Identities = 196/294 (67%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||||| ||||||| |||||| || | | || | || ||||| ||||||||| Sbjct 14095 GATGACAACAGTCTCGGGGTTGCTGCAGCCTCGGCAGAGGACGAACTTCTTGATGAAACC 14154 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| || |||||||| | || ||| ||||| | ||||||| ||| | || || | Sbjct 14155 ATCGAGAAGGTCCTGGAGTTTGGCGGCCTCGTGAGCACCGTTGATGATCCAACGATCATC 14214 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 ||| ||| | || || || || ||||| | | |||||||| | ||| | Sbjct 14215 CTTGGGGTCGGTGTTGGTCTGGGCTCCGAGCTCAAAGGCAAAGTACTTGATGACGTAGTT 14274 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 || ||| | || ||||| |||| | | | |||||| | ||| |||||||| || Sbjct 14275 GGGGTCACGGCTGAGGGCCTTAGCGACATTGACGAGGTTGACAACGACGGTCTTGATACC 14334 Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 ||| || |||||||| || |||| | || | ||| |||||||| ||||| Sbjct 14335 GTTTCCTTTTCCTTCAACTTTGGTGATGAGCTTCTCCATCTTGTAGCGATAGAA 14388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412607343097094