Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq11478 86.0 2e-12 >seq11478 Length=2507 Score = 86.0 bits (94), Expect = 2e-12 Identities = 178/260 (68%), Gaps = 14/260 (5%) Strand=Plus/Minus Query 18571 TGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTCGTATTC 18630 ||||||||| | | | |||||||||| |||||| || ||||||| || || | || Sbjct 277 TGAATCGCCCCGGCTTCTCTAGACACTCTTGAGCCGTTGGAAATATTGCTTCTCAAACTC 218 Query 18631 AGTTGGTGGCATAT---GATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTC 18687 || | ||| | | | ||||||||||| || || ||| || ||||| || Sbjct 217 TACCGGCG--ATAGCCCGTTGGCG-GAACCATGCCGGCGTTTCGGGTTGTAGAACATCTC 161 Query 18688 GATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTT----CT 18743 ||||||||| || ||||| | || || || || | | ||| ||| ||| || Sbjct 160 GATGTAATCGAAGATATCCCGCCGGGCCTCCTC---CCTGTCGT-GATAGGTTTGGCGCT 105 Query 18744 TTATCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGT 18803 | || || || || ||||| | ||||| ||||| || || || || ||||| || |||| Sbjct 104 TGATGCGCTCCCGCTTCAGCAATTGGAAGAAACTCTCCGCCACCGCATTGTCGTGGCAGT 45 Query 18804 TACCGCGACGGCTCATACTG 18823 | ||||| || ||||| ||| Sbjct 44 TCCCGCGCCGACTCATGCTG 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127033727217120