Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq11478 86.0 2e-12
>seq11478
Length=2507
Score = 86.0 bits (94), Expect = 2e-12
Identities = 178/260 (68%), Gaps = 14/260 (5%)
Strand=Plus/Minus
Query 18571 TGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTCGTATTC 18630
||||||||| | | | |||||||||| |||||| || ||||||| || || | ||
Sbjct 277 TGAATCGCCCCGGCTTCTCTAGACACTCTTGAGCCGTTGGAAATATTGCTTCTCAAACTC 218
Query 18631 AGTTGGTGGCATAT---GATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTC 18687
|| | ||| | | | ||||||||||| || || ||| || ||||| ||
Sbjct 217 TACCGGCG--ATAGCCCGTTGGCG-GAACCATGCCGGCGTTTCGGGTTGTAGAACATCTC 161
Query 18688 GATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTT----CT 18743
||||||||| || ||||| | || || || || | | ||| ||| ||| ||
Sbjct 160 GATGTAATCGAAGATATCCCGCCGGGCCTCCTC---CCTGTCGT-GATAGGTTTGGCGCT 105
Query 18744 TTATCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGT 18803
| || || || || ||||| | ||||| ||||| || || || || ||||| || ||||
Sbjct 104 TGATGCGCTCCCGCTTCAGCAATTGGAAGAAACTCTCCGCCACCGCATTGTCGTGGCAGT 45
Query 18804 TACCGCGACGGCTCATACTG 18823
| ||||| || ||||| |||
Sbjct 44 TCCCGCGCCGACTCATGCTG 25
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127033727217120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |