Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 102 6e-17
>seq1095
Length=312686
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||||||||| || || || |||||||| ||| | ||| || ||
Sbjct 81817 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 81876
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 81877 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 81936
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||||||||| | || || || || ||||| || | | |||| | | ||||||||
Sbjct 81937 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 81996
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||||| ||||| ||||| | ||| ||||| || || | || || ||||
Sbjct 81997 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGGAA 82045
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||||||||| || || || |||||||| ||| | ||| || ||
Sbjct 88638 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 88697
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 88698 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 88757
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||||||||| | || || || || ||||| || | | |||| | | ||||||||
Sbjct 88758 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 88817
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||||| ||||| ||||| | ||| ||||| || || | || || ||||
Sbjct 88818 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGGAA 88866
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| || ||||| ||||| || || ||||| || ||||| | || |||| |
Sbjct 84464 AAAATGCAGATCTTTGTGAAAACGTTGACCGGCAAGACAATTACGTTGGAGGTGGAGCCG 84523
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| || | | | ||||| ||||| || || || || | || ||
Sbjct 84524 TCGGACACGATTGAGAATGTAAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGAC 84583
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||||||||| || | ||| || || ||||| ||||| | || ||| || | ||||||
Sbjct 84584 CAGCAGAGACTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCAGAACCCTGTCTGACTAC 84643
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||||| || |||||||| || | ||| ||||| |||| ||||| || ||||
Sbjct 84644 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTGAGGTTGCGTGGAGGAA 84695
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || || |||||| | || ||||| ||||| || | ||| || | |
Sbjct 81589 ATGCAGATATTCGTAAAAACTCTGACCGGCAAGACCATCACTTTGGAAGTTGAACCATCC 81648
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| ||| | ||||| ||||| || || ||||| | ||| || |||
Sbjct 81649 GATACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 81708
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | ||||| | ||| || || ||||| || || | | || | | |||||||||
Sbjct 81709 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 81768
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||||||||| || || | ||| |||| ||||||||||| || ||
Sbjct 81769 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGCGTGGAGG 81815
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || || |||||| | || ||||| ||||| || | ||| || | |
Sbjct 88410 ATGCAGATATTCGTAAAAACTCTGACCGGCAAGACCATCACTTTGGAAGTTGAACCATCC 88469
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| ||| | ||||| ||||| || || ||||| | ||| || |||
Sbjct 88470 GATACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 88529
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | ||||| | ||| || || ||||| || || | | || | | |||||||||
Sbjct 88530 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 88589
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||||||||| || || | ||| |||| ||||||||||| || ||
Sbjct 88590 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGCGTGGAGG 88636
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| |||| |
Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| | | | || || ||||| || || || || | || || ||
Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||||||||| | || || || || |||||||| | | ||| || | ||||||||
Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| ||||| || ||||| | ||| |||| | ||| | || || ||||
Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTTCTCAGACTTCGTGGTGGAA 90690
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| |
Sbjct 89093 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89152
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| ||| | || || |||||| || || ||||| | || |||||
Sbjct 89153 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89212
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||| | || || || |||||||| || | || |||| | | ||||||||
Sbjct 89213 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89272
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || || || | ||| | |||||| | | || || ||||
Sbjct 89273 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89322
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| |
Sbjct 89321 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89380
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| ||| | || || |||||| || || ||||| | || |||||
Sbjct 89381 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89440
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||| | || || || |||||||| || | || |||| | | ||||||||
Sbjct 89441 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89500
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || || || | ||| | |||||| | | || || ||||
Sbjct 89501 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89550
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| |
Sbjct 89549 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89608
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| ||| | || || |||||| || || ||||| | || |||||
Sbjct 89609 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89668
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||| | || || || |||||||| || | || |||| | | ||||||||
Sbjct 89669 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89728
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || || || | ||| | |||||| | | || || ||||
Sbjct 89729 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89778
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| |
Sbjct 89777 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89836
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| ||| | || || |||||| || || ||||| | || |||||
Sbjct 89837 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89896
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||| | || || || |||||||| || | || |||| | | ||||||||
Sbjct 89897 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89956
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || || || | ||| | |||||| | | || || ||||
Sbjct 89957 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 90006
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| |
Sbjct 90005 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 90064
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| ||| | || || |||||| || || ||||| | || |||||
Sbjct 90065 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 90124
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||| | || || || |||||||| || | || |||| | | ||||||||
Sbjct 90125 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 90184
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || || || | ||| | |||||| | | || || ||||
Sbjct 90185 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 90234
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| |
Sbjct 90233 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 90292
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| ||| ||| | || || |||||| || || ||||| | || |||||
Sbjct 90293 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 90352
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||| | || || || |||||||| || | || |||| | | ||||||||
Sbjct 90353 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 90412
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| || || || || || | ||| | |||||| | | || || ||||
Sbjct 90413 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 90462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398650467082462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |