Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1095 102 6e-17 >seq1095 Length=312686 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||||||||| || || || |||||||| ||| | ||| || || Sbjct 81817 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 81876 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || || ||||| ||||| ||||| | || || ||| Sbjct 81877 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 81936 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | || || || || ||||| || | | |||| | | |||||||| Sbjct 81937 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 81996 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| ||||| ||||| | ||| ||||| || || | || || |||| Sbjct 81997 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGGAA 82045 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||||||||| || || || |||||||| ||| | ||| || || Sbjct 88638 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 88697 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || || ||||| ||||| ||||| | || || ||| Sbjct 88698 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 88757 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | || || || || ||||| || | | |||| | | |||||||| Sbjct 88758 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 88817 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| ||||| ||||| | ||| ||||| || || | || || |||| Sbjct 88818 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGGAA 88866 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || ||||| ||||| || || ||||| || ||||| | || |||| | Sbjct 84464 AAAATGCAGATCTTTGTGAAAACGTTGACCGGCAAGACAATTACGTTGGAGGTGGAGCCG 84523 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || | | | ||||| ||||| || || || || | || || Sbjct 84524 TCGGACACGATTGAGAATGTAAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGAC 84583 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 ||||||||||| || | ||| || || ||||| ||||| | || ||| || | |||||| Sbjct 84584 CAGCAGAGACTCATCTTTGCCGGAAAGCAGCTCGAGGATGGCAGAACCCTGTCTGACTAC 84643 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| || |||||||| || | ||| ||||| |||| ||||| || |||| Sbjct 84644 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTGAGGTTGCGTGGAGGAA 84695 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || |||||| | || ||||| ||||| || | ||| || | | Sbjct 81589 ATGCAGATATTCGTAAAAACTCTGACCGGCAAGACCATCACTTTGGAAGTTGAACCATCC 81648 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | ||||| ||||| || || ||||| | ||| || ||| Sbjct 81649 GATACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 81708 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||| || || ||||| || || | | || | | ||||||||| Sbjct 81709 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 81768 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||| || || | ||| |||| ||||||||||| || || Sbjct 81769 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGCGTGGAGG 81815 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || |||||| | || ||||| ||||| || | ||| || | | Sbjct 88410 ATGCAGATATTCGTAAAAACTCTGACCGGCAAGACCATCACTTTGGAAGTTGAACCATCC 88469 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | ||||| ||||| || || ||||| | ||| || ||| Sbjct 88470 GATACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 88529 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||| || || ||||| || || | | || | | ||||||||| Sbjct 88530 CAGCGTCTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 88589 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||| || || | ||| |||| ||||||||||| || || Sbjct 88590 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGCGTGGAGG 88636 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| |||| | Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || || ||||| || || || || | || || || Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||||||||| | || || || || |||||||| | | ||| || | |||||||| Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||| || ||||| | ||| |||| | ||| | || || |||| Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTTCTCAGACTTCGTGGTGGAA 90690 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| | Sbjct 89093 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89152 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || |||||| || || ||||| | || ||||| Sbjct 89153 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89212 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | || || || |||||||| || | || |||| | | |||||||| Sbjct 89213 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89272 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || | ||| | |||||| | | || || |||| Sbjct 89273 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89322 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| | Sbjct 89321 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89380 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || |||||| || || ||||| | || ||||| Sbjct 89381 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89440 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | || || || |||||||| || | || |||| | | |||||||| Sbjct 89441 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89500 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || | ||| | |||||| | | || || |||| Sbjct 89501 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89550 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| | Sbjct 89549 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89608 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || |||||| || || ||||| | || ||||| Sbjct 89609 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89668 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | || || || |||||||| || | || |||| | | |||||||| Sbjct 89669 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89728 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || | ||| | |||||| | | || || |||| Sbjct 89729 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89778 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| | Sbjct 89777 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 89836 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || |||||| || || ||||| | || ||||| Sbjct 89837 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 89896 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | || || || |||||||| || | || |||| | | |||||||| Sbjct 89897 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 89956 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || | ||| | |||||| | | || || |||| Sbjct 89957 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 90006 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| | Sbjct 90005 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 90064 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || |||||| || || ||||| | || ||||| Sbjct 90065 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 90124 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | || || || |||||||| || | || |||| | | |||||||| Sbjct 90125 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 90184 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || | ||| | |||||| | | || || |||| Sbjct 90185 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 90234 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| | Sbjct 90233 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTAGAGCCATC 90292 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| ||| | || || |||||| || || ||||| | || ||||| Sbjct 90293 AGACACTATCGAGAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCA 90352 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||| | || || || |||||||| || | || |||| | | |||||||| Sbjct 90353 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAAGATGGCAGAACACTATCAGACTACAA 90412 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || || || || || | ||| | |||||| | | || || |||| Sbjct 90413 CATCCAGAAAGAATCCACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 90462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398650467082462