Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_023574.1 Length=128546 Score E Sequences producing significant alignments: (Bits) Value seq10675 172 5e-38 >seq10675 Length=2892 Score = 172 bits (190), Expect = 5e-38 Identities = 133/154 (86%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 28233 CAATTAAAAGCAGAAATCAATAAAA-AATATCACTTAATGCTTGATaa-aaaaaTAATAT 28290 |||||||||| |||||| ||||||| ||||||| |||| |||| || | ||| | || Sbjct 377 CAATTAAAAGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAACGATAATTA-AT 435 Query 28291 TTTGATATAATAATATGTATAGAAATAAAGGAGAACTAACACATGGTAGTTAAATTAACA 28350 |||| ||||||| ||| |||||||||||||||||||||||| |||||||| |||||||| Sbjct 436 TTTGGTATAATAGTATATATAGAAATAAAGGAGAACTAACAAATGGTAGTCAAATTAACG 495 Query 28351 CAAAAACAAGATGATTATCTTAAAACTTTTGGAA 28384 |||||||||| |||||||||| |||||||||||| Sbjct 496 CAAAAACAAGCTGATTATCTTGAAACTTTTGGAA 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410989061872666