Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq2630 262 5e-65
seq1041 221 2e-52
>seq2630
Length=110644
Score = 262 bits (290), Expect = 5e-65
Identities = 464/670 (69%), Gaps = 21/670 (3%)
Strand=Plus/Minus
Query 36953 AGAACTTATGGTTAAAGATGAGCCTAAAACGAAAAATCAGGTGGTTTACATTGCTACTAC 37012
|||| | ||| ||||||| || |||| ||| | || ||| || | |||||||| |||||
Sbjct 95625 AGAAATGATGATTAAAGACGATCCTATAACAAGAACTCAAGTTATCTACATTGCAACTAC 95566
Query 37013 AAAACTTTATGCTAAAAATAACCTTTTCAAAGTTGGCGGAATTGAAAGTATCGATAAGCT 37072
| | ||||| || ||| ||||||||||| ||| |||| || ||||||
Sbjct 95565 TGAGTTGTATGCCAATTCCAACAACTTCAAAGTTGGTGGAGTTGATGATACAAGTAAGCT 95506
Query 37073 TAAATCTAGACTGTGTACTTATAATACCGGTAGAGTTAGTGAAGACCTATTTTACTACTC 37132
|||||| ||| ||||||| ||||| || || || |||| ||| || | ||| || || ||
Sbjct 95505 TAAATCCAGATTGTGTACATATAACACTGGAAGGGTTACTGAGGATCAATTCTATTATTC 95446
Query 37133 AGATACTTTTATGGTTTCGGATTATCATCAAATTGAATCGAGATTAAAAGATTTATTATT 37192
||| ||||||||| || |||| || | || ||| | ||| ||| |||| |||
Sbjct 95445 CAATATTTTTATGGTATCTAATTACCACCTTATAGAAGCTCAATTGAAAAATTTGTTACA 95386
Query 37193 CTGTTTTCGAAATAAAAAAGAGAAAGAAATGTATCGCCTTCATTACACTGATTTGAGATA 37252
| | ||| | || |||||||| || || ||||| || || || ||| | || | | |||
Sbjct 95385 CCGATTTAGGAACAAAAAAGAAAAGGAGATGTACCGACTACACTACTCAGACATCAAATA 95326
Query 37253 TATAGTCGACTATTTGTGTAATCATTACTCTGAAGAAGTAGATGAAGTAAACTCAAAATT 37312
||| ||||| ||| | ||||| | ||||| || || ||| | ||||| || ||
Sbjct 95325 TATTGTCGATTATCTCTGTAAGAGAGATGGAGAAGACGTGGAAGAAATCAACTCTAAGTT 95266
Query 37313 GACTCAATTTATTGCCAATCTTAATAAACGTAAATTAAGACCTGTTGTTCCACCTGC-AT 37371
|||||| || ||||| ||| | |||| ||| || || || || | ||||||| | | |
Sbjct 95265 GACTCAGTTAATTGCTAATTTAAATAGACGCAATTTGAGGCCCATAGTTCCACTTCCGAA 95206
Query 37372 TACACTCTTATCTAACAAGTGTAACATGTTTAAATAAAGATGGAACTGTGGAT--TGTAC 37429
||| | |||||||||| ||| || |||| || ||||||||||||||||| |||
Sbjct 95205 CACAAGC-TATCTAACAAATGTGACTCGTTTGAAAGAAGATGGAACTGTGGATCAAGTA- 95148
Query 37430 CACTATAAAATC-GTCTTC--------ATTTGAGGGAATGGTAAAAGAGTACATCTTAAA 37480
|| || ||||| | || | |||||| | || |||||||| || |||
Sbjct 95147 -ACCATTAAATCTGACTCCGTTGAAGATTTTGAGAAGGTTGTGAAAGAGTATATTCTAAC 95089
Query 37481 ACTAAGT---GATACAACAACTGAGATAACTaaaaaaaaGGTATTTGATGACCTTCAAAT 37537
||| | | | |||| | ||| |||| |||||||| || || ||| | ||
Sbjct 95088 CATAAATCCAGGTGTAACATC---GATTTCTAAGAAAAAGGTGTTCGACGACTTATGTAT 95032
Query 37538 TAAAAAAGATCGTAAAGACAAGTTTCCAATTTTAAGAGCTATTTTGGCTCAACTAAGACC 37597
|| ||| |||| || | |||||||||||| | || |||||| | ||| | |||||
Sbjct 95031 AAAGAAAAATCGAAATGCTAAGTTTCCAATTCTTCAAGTTATTTTAGGCCAAATTAGACC 94972
Query 37598 AGAAATTAAA 37607
||||||||||
Sbjct 94971 AGAAATTAAA 94962
Score = 251 bits (278), Expect = 9e-62
Identities = 355/496 (72%), Gaps = 2/496 (0%)
Strand=Plus/Minus
Query 175338 AAAGAGTATGCTATAGTTTTAAAAGAACTTATGGTTAAAGATGAACCTAAAACGAAAAAT 175397
|||||||| || | |||| |||||| | ||| ||||||| || |||| ||| | || |
Sbjct 95648 AAAGAGTACTCTCTTATTTTGAAAGAAATGATGATTAAAGACGATCCTATAACAAGAACT 95589
Query 175398 CAGGTGGTTTACATTGCTACCACAAAACTTTATGCTAAAAATAACCTTTTCAAAGTTGGC 175457
|| || | |||||||| || || | | ||||| || ||| |||||||||||
Sbjct 95588 CAAGTTATCTACATTGCAACTACTGAGTTGTATGCCAATTCCAACAACTTCAAAGTTGGT 95529
Query 175458 GGAATTGAAAGTATCGATAAGCTTAAATCTAGACTGTGTACTTATAATACTGGTAGAGTT 175517
||| |||| || |||||||||||| ||| ||||||| ||||| ||||| || |||
Sbjct 95528 GGAGTTGATGATACAAGTAAGCTTAAATCCAGATTGTGTACATATAACACTGGAAGGGTT 95469
Query 175518 AGTGAAGACCTATTTTACTACTCAGATACTTTTATGGTATCAGATTACCATCAAATCGAA 175577
| ||| || | ||| || || || ||| |||||||||||| ||||||| | || |||
Sbjct 95468 ACTGAGGATCAATTCTATTATTCCAATATTTTTATGGTATCTAATTACCACCTTATAGAA 95409
Query 175578 TCGAGATTAAAAGATTTATTATCCTGTTTTCGAAATAAAAAAGAGAAAGAAATGTATCGC 175637
| ||| ||| |||| ||| | | ||| | || |||||||| || || ||||| ||
Sbjct 95408 GCTCAATTGAAAAATTTGTTACACCGATTTAGGAACAAAAAAGAAAAGGAGATGTACCGA 95349
Query 175638 CTTCATTACACTGATTTGAGATATATAGTCGACTATTTGTGTAATCATTACTCTGAAGAA 175697
|| || ||| | || | | |||||| ||||| ||| | ||||| | |||||
Sbjct 95348 CTACACTACTCAGACATCAAATATATTGTCGATTATCTCTGTAAGAGAGATGGAGAAGAC 95289
Query 175698 GTAGACGAAGTAAACTCTAAACTAGCTCAATTTATTGCCAATTTAAATAAACGCAAATTA 175757
|| || ||| | |||||||| | |||| || ||||| |||||||||| |||||| ||
Sbjct 95288 GTGGAAGAAATCAACTCTAAGTTGACTCAGTTAATTGCTAATTTAAATAGACGCAATTTG 95229
Query 175758 AGACCTGTTGTTCCACCTGC-ATTACACTCATATTTAACAAGTGTAACATGTTTAAATAA 175816
|| || | ||||||| | | | ||| | ||| |||||| ||| || |||| || |
Sbjct 95228 AGGCCCATAGTTCCACTTCCGAACACAAGC-TATCTAACAAATGTGACTCGTTTGAAAGA 95170
Query 175817 AGACGGAACTGTGGAT 175832
||| ||||||||||||
Sbjct 95169 AGATGGAACTGTGGAT 95154
>seq1041
Length=325342
Score = 221 bits (244), Expect = 2e-52
Identities = 453/668 (68%), Gaps = 29/668 (4%)
Strand=Plus/Plus
Query 36953 AGAACTTATGGTTAAAGATGAGCCTAAAACGAAAAATCAGGTGGTTTACATTGCTACTAC 37012
|||| | ||| ||||||| || |||| ||| | || ||| || | |||||||| |||||
Sbjct 171308 AGAAATGATGATTAAAGACGATCCTATAACAAGAACTCAAGTTATCTACATTGCAACTAC 171367
Query 37013 AAAACTTTATGCTAAAAATAACCTTTTCAAAGTTGGCGGAATTGAAAGTATCGATAAGCT 37072
| | ||||| || ||| ||||||||||| ||| |||| || ||||||
Sbjct 171368 TGAGTTGTATGCCAATTCCAACAACTTCAAAGTTGGTGGAGTTGATGATACAAGTAAGCT 171427
Query 37073 TAAATCTAGACTGTGTACTTATAATACCGGTAGAGTTAGTGAAGACCTATTTTACTACTC 37132
|||||| ||| ||||||| ||||| || || || |||| ||| || | ||| || || ||
Sbjct 171428 TAAATCCAGATTGTGTACATATAACACTGGAAGGGTTACTGAGGATCAATTCTATTATTC 171487
Query 37133 AGATACTTTTATGGTTTCGGATTATCATCAAATTGAATCGAGATTAAAAGATTTATTATT 37192
||| ||||||||| || |||| || | || ||| | ||| ||| |||| |||
Sbjct 171488 CAATATTTTTATGGTATCTAATTACCACCTTATAGAAGCTCAATTGAAAAATTTGTTACA 171547
Query 37193 CTGTTTTCGAAATAAAAAAGAGAAAGAAATGTATCGCCTTCATTACACTGATTTGAGATA 37252
| | ||| | || |||||||| || || ||||| || |||||||| | || | | ||
Sbjct 171548 CCGATTTAGGAACAAAAAAGAAAAGGAGATGTACCGACTTCATTATTCGGACGTCAAGTA 171607
Query 37253 TATAGTCGACTATTTGTGTAATCATTACTCTGAAGAAGTAGATGAAGTAAACTCAAAATT 37312
|| || | ||| | | || | | ||||| |||||| |||| ||||| || ||
Sbjct 171608 CATTATCAATTATCTCTCCAAACGAGATGGCGAAGATGTAGATCAAGTCAACTCCAAGTT 171667
Query 37313 GACTCAATTTATTGCCAATCTTAATAAACGTAAATTAAGACCTGTTGTTCCACCTGCATT 37372
|||||||||||| ||| | |||| || ||| || |||||| | ||||||||| ||
Sbjct 171668 GACTCAATTTATATGTAATTTGAATAGACATAACTTGAGACCTATAGTTCCACCTCCA-A 171726
Query 37373 ACAC-TCTTATCTAACAAGTGTAACATGTTTAAATAAAGATGGAACTGTGGATTGTACCA 37431
|||| ||| || || ||| | ||| || ||||| | ||| |
Sbjct 171727 ACACAAGTTACCTTACTTCAGTAGCTCTTTTGAAAGAAGAT----------AAAGTA--A 171774
Query 37432 CTATAAAATC-GTCT-TC-------ATTTGAGGGAATGGTAAAAGAGTACATCTTAAAAC 37482
| || ||||| | || || ||||||| | | || ||||||||||| ||| |
Sbjct 171775 CCATTAAATCAGACTCTCCTGAAGAATTTGAGAGGGTAGTGAAAGAGTACATTCTAACCC 171834
Query 37483 TAAGT---GATACAACAACTGAGATAACTaaaaaaaaGGTATTTGATGACCTTCAAATTA 37539
||| | | | |||| | ||| |||| |||||||| || || ||| | || |
Sbjct 171835 TAAATCCAGGTGTAACATC---GATTTCTAAGAAAAAGGTGTTCGACGACTTATGTATAA 171891
Query 37540 AAAAAGATCGTAAAGACAAGTTTCCAATTTTAAGAGCTATTTTGGCTCAACTAAGACCAG 37599
| ||| |||| || | |||||||||||| | || |||||| | ||| | |||||||
Sbjct 171892 AGAAAAATCGAAATGCTAAGTTTCCAATTCTTCAAGTTATTTTAGGCCAAATTAGACCAG 171951
Query 37600 AAATTAAA 37607
||||||||
Sbjct 171952 AAATTAAA 171959
Score = 206 bits (228), Expect = 3e-48
Identities = 323/462 (70%), Gaps = 0/462 (0%)
Strand=Plus/Plus
Query 175317 AATGAAGAGTTAGAAGAAGCTAAAGAGTATGCTATAGTTTTAAAAGAACTTATGGTTAAA 175376
|| |||||| | | || | |||||||| || | |||| |||||| | ||| |||||
Sbjct 171264 AAAGAAGAGCTTAACGATACCAAAGAGTACACTCTTATTTTGAAAGAAATGATGATTAAA 171323
Query 175377 GATGAACCTAAAACGAAAAATCAGGTGGTTTACATTGCTACCACAAAACTTTATGCTAAA 175436
|| || |||| ||| | || ||| || | |||||||| || || | | ||||| ||
Sbjct 171324 GACGATCCTATAACAAGAACTCAAGTTATCTACATTGCAACTACTGAGTTGTATGCCAAT 171383
Query 175437 AATAACCTTTTCAAAGTTGGCGGAATTGAAAGTATCGATAAGCTTAAATCTAGACTGTGT 175496
||| ||||||||||| ||| |||| || |||||||||||| ||| |||||
Sbjct 171384 TCCAACAACTTCAAAGTTGGTGGAGTTGATGATACAAGTAAGCTTAAATCCAGATTGTGT 171443
Query 175497 ACTTATAATACTGGTAGAGTTAGTGAAGACCTATTTTACTACTCAGATACTTTTATGGTA 175556
|| ||||| ||||| || |||| ||| || | ||| || || || ||| ||||||||||
Sbjct 171444 ACATATAACACTGGAAGGGTTACTGAGGATCAATTCTATTATTCCAATATTTTTATGGTA 171503
Query 175557 TCAGATTACCATCAAATCGAATCGAGATTAAAAGATTTATTATCCTGTTTTCGAAATAAA 175616
|| ||||||| | || ||| | ||| ||| |||| ||| | | ||| | || |||
Sbjct 171504 TCTAATTACCACCTTATAGAAGCTCAATTGAAAAATTTGTTACACCGATTTAGGAACAAA 171563
Query 175617 AAAGAGAAAGAAATGTATCGCCTTCATTACACTGATTTGAGATATATAGTCGACTATTTG 175676
||||| || || ||||| || |||||||| | || | | || || || | ||| |
Sbjct 171564 AAAGAAAAGGAGATGTACCGACTTCATTATTCGGACGTCAAGTACATTATCAATTATCTC 171623
Query 175677 TGTAATCATTACTCTGAAGAAGTAGACGAAGTAAACTCTAAACTAGCTCAATTTATTGCC 175736
| || | | ||||| ||||| |||| ||||| || | ||||||||||
Sbjct 171624 TCCAAACGAGATGGCGAAGATGTAGATCAAGTCAACTCCAAGTTGACTCAATTTATATGT 171683
Query 175737 AATTTAAATAAACGCAAATTAAGACCTGTTGTTCCACCTGCA 175778
||||| |||| || || || |||||| | ||||||||| ||
Sbjct 171684 AATTTGAATAGACATAACTTGAGACCTATAGTTCCACCTCCA 171725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 654898643422000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |