Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_023697.1 Length=48420 Score E Sequences producing significant alignments: (Bits) Value seq6496 95.1 4e-15 >seq6496 Length=10970 Score = 95.1 bits (104), Expect = 4e-15 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 11676 AGGAAGCGTTCGACCTGATCGTCGCGGCCACCCAGAACGGCCTGAACATCTCCAACGATC 11735 |||| || ||||| | ||| ||| ||| ||| |||||| ||||| || | |||| Sbjct 10556 AGGAGGCCTTCGATATCCTCGCCGCCGCCGCCCGCAACGGCGTGAACCGGGCCGAGGATC 10497 Query 11736 TGCTCGACACGTTCGAGGAATACGGCACCAAGTTCCGCGACCTCGGCATCACCGGCCAAG 11795 | |||||||| ||| ||| ||| | | ||||| | ||||| || ||| || Sbjct 10496 TCCTCGACACATTCACGGAGTACCCGGTCGTGCTCCGCAAGCTCGGTCTCGACGGGCAGC 10437 Query 11796 AGGCCCTCGGCCTGATTAACCAGATGTGGG---AGGGC-GGTGCCCGCAACGTCGATGTC 11851 || |||||||| | |||||| ||| | ||| || || |||||| ||| ||| Sbjct 10436 AGATGCTCGGCCTCCTCAACCAG----GGGCTCACGGCAGGGGCGCGCAACAGCGACGTC 10381 Query 11852 GCCGCCGACGCGCTCAAAGAGTTCGCGATCTCGGTGACCGACTCGTCG 11899 | ||||||||||||||| |||||| |||| | ||||||| ||||| Sbjct 10380 GTCGCCGACGCGCTCAAGGAGTTCCAGATCCGCGCGACCGACGCGTCG 10333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154736802372072