Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_024385.1
Length=28193
Score E
Sequences producing significant alignments: (Bits) Value
seq13014 105 1e-18
>seq13014
Length=1707
Score = 105 bits (116), Expect = 1e-18
Identities = 240/360 (67%), Gaps = 6/360 (2%)
Strand=Plus/Minus
Query 22624 TCTTTGATACGTTGTGGtttttttATAACCAACTAATACATCTTCTTTTTCTAAAATTTC 22683
||| | ||| ||| |||| | |||||||||| || || || | ||||| | |||||
Sbjct 780 TCTCTTATATGTTTTGGTCTGTTTATAACCACTAAAAACGTCATGCTTTTCAATTATTTC 721
Query 22684 AACAGCTAGATTATACTTTATATCACTTACCTGTTTACTGTATAAATAGT---TCATTCG 22740
|||||||||||| |||| ||| | | |||| |||||||| | || ||
Sbjct 720 TTTAGCTAGATTATATTTTAAATCTGAAATTTCTTTAGAATATAAATAATCTCTCTTT-- 663
Query 22741 ATCATTGCCAAAACTATTGACTAACAACTTCAATTCGTCATCAACAGTTTTATTTTCTTT 22800
| ||| || ||| || | | ||||||||| |||||| || || ||||||||
Sbjct 662 -TTATTACCGAAAGAGTTAATCAGCAACTTCAAAAAGTCATCTGTTGTCTTGTTTTCTTT 604
Query 22801 TTCTCTAATTTCAATAAACTCATCACGACTAACAATTAGCGTTTTTATCCATTCCCTGTC 22860
|| |||| || ||||||| ||| |||||| || |||| ||||| || | |||
Sbjct 603 CTCCTTAATCTCGGTAAACTCTGTACGTGAAACAATAAGGCTTTTAATCCACTCACGGTC 544
Query 22861 TTGGTTTAAAACACGGTTAAACATATCAGTAATTGTTTTATCTAAGTCATTATAAACAAC 22920
||| | ||| || | ||| | || || || |||||||| |||||| ||
Sbjct 543 TTGAGAGATAACTCGTTCAAAAGCGTTGGTTATATCCTTGTCTAAGTCGTTATAATATAC 484
Query 22921 ATCGATGCCGTTAATCATCAGTTCCGCAGTAATTGCACCGCCACCACCGAAGACATCGTA 22980
|| | ||| || | || ||| | |||||||| ||||| || ||||||| |||||
Sbjct 483 TTCTAAGCCATTTAAAATACATTCGGATGTAATTGCTCCGCCTCCTCCGAAGATGTCGTA 424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 90050697179224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |