Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq738 125 2e-23
>seq738
Length=407637
Score = 125 bits (138), Expect = 2e-23
Identities = 274/403 (68%), Gaps = 12/403 (3%)
Strand=Plus/Minus
Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817
|||| |||||| | || | |||||| ||||| |||||| | || ||| || ||||
Sbjct 384180 TTGCAATCTATTTAGAGTCATGGCATATTGATAT-TTTGAAATTTTTGAATTTGAAAAAA 384122
Query 110818 ATCAA-GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876
| | || ||| |||| |||||| | |||||||| |||| | ||| | || |||
Sbjct 384121 AATATTGGCAATGATGAACTTAGAGCAAGAGATTTATTCTATGGTCTTTGGTTGTCTGAT 384062
Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936
|||| ||| | || || | |||| || ||| | | |||||||| ||| | |
Sbjct 384061 CTATTTATGTCTAGGGTGGAAAATAATGAAATTTGGAGTTTAATGTGTCCAAATCAATGT 384002
Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAA 110996
|| |||||| || || | || || ||||||||| || || | | |||||||| ||
Sbjct 384001 CCAAATCTATCAGACGTTTGGGGTAATGAGTTTGAATTACTATATGGACAATATGAACAA 383942
Query 110997 GAA--GGCAAGTTTCGCAAACAAATTCCAGCT-CAAGAACTTTGGT--TCAAAATCCTTG 111051
||| | | ||| | ||||||| || | ||||| ||| | | ||||| |||
Sbjct 383941 GAAAAGAGATATTTGG--AACAAAT---AGATGCAAGAGAATTGTTCATGAAAATAATTG 383887
Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111
| ||| ||||||||||| || ||||| || | ||| ||| ||||||| | || |
Sbjct 383886 ATAGTCAAATTGAAACTGGATTACCCTATATGTTATTTAAGGATAGTATTAATAGAAAGT 383827
Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154
|||| ||||| ||||| ||||| || || | ||||| || ||
Sbjct 383826 CTAACCAAATTAATTTGGGAACCATAAAATGCAGTAACTTATG 383784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186104837236238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |