Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq738 125 2e-23 >seq738 Length=407637 Score = 125 bits (138), Expect = 2e-23 Identities = 274/403 (68%), Gaps = 12/403 (3%) Strand=Plus/Minus Query 110758 TTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAA 110817 |||| |||||| | || | |||||| ||||| |||||| | || ||| || |||| Sbjct 384180 TTGCAATCTATTTAGAGTCATGGCATATTGATAT-TTTGAAATTTTTGAATTTGAAAAAA 384122 Query 110818 ATCAA-GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 | | || ||| |||| |||||| | |||||||| |||| | ||| | || ||| Sbjct 384121 AATATTGGCAATGATGAACTTAGAGCAAGAGATTTATTCTATGGTCTTTGGTTGTCTGAT 384062 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 |||| ||| | || || | |||| || ||| | | |||||||| ||| | | Sbjct 384061 CTATTTATGTCTAGGGTGGAAAATAATGAAATTTGGAGTTTAATGTGTCCAAATCAATGT 384002 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAA 110996 || |||||| || || | || || ||||||||| || || | | |||||||| || Sbjct 384001 CCAAATCTATCAGACGTTTGGGGTAATGAGTTTGAATTACTATATGGACAATATGAACAA 383942 Query 110997 GAA--GGCAAGTTTCGCAAACAAATTCCAGCT-CAAGAACTTTGGT--TCAAAATCCTTG 111051 ||| | | ||| | ||||||| || | ||||| ||| | | ||||| ||| Sbjct 383941 GAAAAGAGATATTTGG--AACAAAT---AGATGCAAGAGAATTGTTCATGAAAATAATTG 383887 Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111 | ||| ||||||||||| || ||||| || | ||| ||| ||||||| | || | Sbjct 383886 ATAGTCAAATTGAAACTGGATTACCCTATATGTTATTTAAGGATAGTATTAATAGAAAGT 383827 Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154 |||| ||||| ||||| ||||| || || | ||||| || || Sbjct 383826 CTAACCAAATTAATTTGGGAACCATAAAATGCAGTAACTTATG 383784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186104837236238