Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1095 91.5 1e-13 >seq1095 Length=312686 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | ||| | || ||||| || |||||| || ||||| |||||||| || || Sbjct 81816 ACCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGA 81757 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || ||||||||||| || | ||||||||| ||| | || Sbjct 81756 AAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGG 81697 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || | | |||| || | || ||| || ||| | Sbjct 81696 GATTCCTTCCTTGTCTTGGATCTT-GGCCTTTACATTCTCGATAGTATCGGATGGTTCAA 81638 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | |||||||| || |||||||| Sbjct 81637 CTTCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 81589 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | ||| | || ||||| || |||||| || ||||| |||||||| || || Sbjct 88637 ACCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGA 88578 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || ||||||||||| || | ||||||||| ||| | || Sbjct 88577 AAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGG 88518 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || | | |||| || | || ||| || ||| | Sbjct 88517 GATTCCTTCCTTGTCTTGGATCTT-GGCCTTTACATTCTCGATAGTATCGGATGGTTCAA 88459 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | |||||||| || |||||||| Sbjct 88458 CTTCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 88410 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || |||||| ||||| || |||||||| || || ||||| | | Sbjct 89309 ACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCC 89250 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || ||||| || || || | ||||||||||||| | || | |||||| || Sbjct 89249 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTT 89190 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | |||| || | ||||| || || || || | |||| Sbjct 89189 GTCTTGAATCTT-AGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGA 89131 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || ||||||||||| ||||| Sbjct 89130 TGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89094 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || |||||| ||||| || |||||||| || || ||||| | | Sbjct 89537 ACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCC 89478 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || ||||| || || || | ||||||||||||| | || | |||||| || Sbjct 89477 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTT 89418 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | |||| || | ||||| || || || || | |||| Sbjct 89417 GTCTTGAATCTT-AGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGA 89359 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || ||||||||||| ||||| Sbjct 89358 TGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89322 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || |||||| ||||| || |||||||| || || ||||| | | Sbjct 89765 ACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCC 89706 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || ||||| || || || | ||||||||||||| | || | |||||| || Sbjct 89705 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTT 89646 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | |||| || | ||||| || || || || | |||| Sbjct 89645 GTCTTGAATCTT-AGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGA 89587 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || ||||||||||| ||||| Sbjct 89586 TGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89550 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || |||||| ||||| || |||||||| || || ||||| | | Sbjct 89993 ACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCC 89934 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || ||||| || || || | ||||||||||||| | || | |||||| || Sbjct 89933 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTT 89874 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | |||| || | ||||| || || || || | |||| Sbjct 89873 GTCTTGAATCTT-AGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGA 89815 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || ||||||||||| ||||| Sbjct 89814 TGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89778 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || |||||| ||||| || |||||||| || || ||||| | | Sbjct 90221 ACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCC 90162 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || ||||| || || || | ||||||||||||| | || | |||||| || Sbjct 90161 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTT 90102 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | |||| || | ||||| || || || || | |||| Sbjct 90101 GTCTTGAATCTT-AGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGA 90043 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || ||||||||||| ||||| Sbjct 90042 TGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 90006 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || |||||| ||||| || |||||||| || || ||||| | | Sbjct 90449 ACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCC 90390 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || ||||| || || || | ||||||||||||| | || | |||||| || Sbjct 90389 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTT 90330 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | |||| || | ||||| || || || || | |||| Sbjct 90329 GTCTTGAATCTT-AGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGA 90271 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || ||||||||||| ||||| Sbjct 90270 TGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 90234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328517484927360