Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 114 1e-20
seq293 86.0 6e-12
>seq1095
Length=312686
Score = 114 bits (126), Expect = 1e-20
Identities = 159/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| | ||||||||| || | | || || ||||||||||||||||| | ||
Sbjct 81810 ACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGAGT 81751
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| ||||| || |||| | |||| |||||||| || ||||| || || ||
Sbjct 81750 GCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGGATTCC 81691
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| || || || || || | | || | |||||||| || || ||||| |
Sbjct 81690 TTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACTTCCAA 81631
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || || ||||||||||||| ||| |||||||||
Sbjct 81630 AGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCATG 81588
Score = 114 bits (126), Expect = 1e-20
Identities = 159/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| | ||||||||| || | | || || ||||||||||||||||| | ||
Sbjct 88631 ACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGAGT 88572
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| ||||| || |||| | |||| |||||||| || ||||| || || ||
Sbjct 88571 GCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGGATTCC 88512
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| || || || || || | | || | |||||||| || || ||||| |
Sbjct 88511 TTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACTTCCAA 88452
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || || ||||||||||||| ||| |||||||||
Sbjct 88451 AGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCATG 88409
>seq293
Length=664131
Score = 86.0 bits (94), Expect = 6e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785
||||| || |||||||| | ||||||||||| || |||||| | ||| || | ||
Sbjct 205512 ATCGGAGAGACCGGGACAGTCGTGCGGACACATGAGGCTCCACATTTGGTCAGCCTCGAC 205571
Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCT 147837
|||||||| ||||| || ||||||||||| ||||| | | |||||| |||
Sbjct 205572 TCGTCGCATGAACAGGTCGGGCACCCACAGTGCGTAGAACAAATCGCGAGCT 205623
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 147934 TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGG 147993
|| || ||||||||||||| |||| | ||||||| || || |||| |||||| | |||
Sbjct 206937 TTGCCTCCCTGGTCGACATAGCGCGACGTGTTGTTGAAGACACGCAGCATGGGCACGAGG 206996
Query 147994 CCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACG 148053
||| | | |||||||||||| ||| | ||| | ||| | | |||||||
Sbjct 206997 CCGTTGGACGTGCCGTTGGTGCCGGCGATGTACGAGCCACTGGCCCTGATGCAGTGCACG 207056
Query 148054 TTAACGCCAATGCC-GCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTA 148112
| | ||| ||||| |||||| |||| || || ||||| | || ||| |||
Sbjct 207057 TGCAGGCCTATGCCTCCCGCCG-ACTTCGAGATCAGCGCGCACTGCTTCAGTGTGTCGTA 207115
Query 148113 GATGCCGTCGATGCTGTC 148130
|||||| |||||||||||
Sbjct 207116 GATGCCTTCGATGCTGTC 207133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476333824196880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |