Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3617 113 5e-20 seq986 100 3e-16 >seq3617 Length=57851 Score = 113 bits (124), Expect = 5e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 146907 CAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG 146966 |||||||| ||| || | || ||||| || | ||| ||||| ||| || | ||||| Sbjct 14060 CAGCTGAACTTTGAGTGCGTCGACGTGATTCAAGTAAACGTGACAGTCGCCTATCGTGTG 14001 Query 146967 CACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA 147026 ||| || || || || | ||||| |||||||| || | |||||| ||||| |||||||| Sbjct 14000 CACGAATTCACCTGGTTCCAGGCCCGTCACGTGAGCTATCATGTACGTGAGAAGCGAGTA 13941 Query 147027 GCTGGCTATGTTGAAGGGGACCCCCAG 147053 ||||||||||||||| || || || || Sbjct 13940 GCTGGCTATGTTGAATGGTACACCTAG 13914 Score = 105 bits (116), Expect = 8e-18 Identities = 194/282 (69%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACG 147108 || ||||||||||| ||||||||||||||| ||| || ||||| | ||||||| Sbjct 12126 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 12067 Query 147109 TAAAACTGGCACAGGAT-GTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTT 147167 || ||||| ||| || ||| || |||||||||||||| || ||||| || ||| Sbjct 12066 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGTCGCTGGCGTT 12008 Query 147168 CCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCA 147227 ||| || | | | | |||||| || || || | | |||| ||| || Sbjct 12007 CCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGTC 11948 Query 147228 CCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCC 147287 | ||||||||| || ||||| || |||| || |||| |||| ||| || Sbjct 11947 ACGCAGCTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTCC 11888 Query 147288 AAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||||| | |||||| |||||||| ||||| || ||||| || Sbjct 11887 AAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 11846 >seq986 Length=341358 Score = 100 bits (110), Expect = 3e-16 Identities = 193/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACG 147108 || ||||||||||| ||||||||||||||| ||| || ||||| | ||||||| Sbjct 236062 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 236003 Query 147109 TAAAACTGGCACAGGAT-GTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTT 147167 || ||||| ||| || ||| || |||||||||||||| || ||||| || ||| Sbjct 236002 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGTCGCTGGCGTT 235944 Query 147168 CCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCA 147227 ||| || | | | | |||||| || || || | | |||| ||| || Sbjct 235943 CCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGTC 235884 Query 147228 CCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCC 147287 | || |||||| || ||||| || |||| || |||| |||| ||| || Sbjct 235883 ACGCAACTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTCC 235824 Query 147288 AAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||||| | |||||| |||||||| ||||| || ||||| || Sbjct 235823 AAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 235782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583148424571200