Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1095 141 8e-29 seq1320 95.1 1e-14 >seq1095 Length=312686 Score = 141 bits (156), Expect = 8e-29 Identities = 171/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| ||||||| |||||| || | || |||||| || |||||||| || | Sbjct 84695 TTCCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 84636 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || ||||| | || || |||||||| || ||||| || | | ||||||||| | | Sbjct 84635 ACAGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTG 84576 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||||||||| |||||| ||| | | | | | |||||| || |||| Sbjct 84575 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCA 84516 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||||| ||| || || || || ||||| ||||||||||| ||||||||| || Sbjct 84515 CCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTTG 84463 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||||| | || || |||||||| || ||||| Sbjct 78074 CCTTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAA 78015 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||||||| | |||| | ||||||||| |||||| ||| | | | Sbjct 78014 ATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTC 77955 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| || |||||||||| ||| || || || || ||||| ||||||||| Sbjct 77954 TCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACA 77895 Query 35726 AATATCTGCATTCTG 35740 || ||||||||| || Sbjct 77894 AAGATCTGCATTTTG 77880 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| || ||||| ||||| || | || ||||||||||||||||| || | Sbjct 81815 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 81756 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || ||||| || | ||||||||||| | || Sbjct 81755 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 81696 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | || ||| | ||| || Sbjct 81695 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 81636 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || |||| |||||| || ||||||||||| Sbjct 81635 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 81589 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| || ||||| ||||| || | || ||||||||||||||||| || | Sbjct 88636 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 88577 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || ||||| || | ||||||||||| | || Sbjct 88576 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 88517 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | || ||| | ||| || Sbjct 88516 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 88457 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || |||| |||||| || ||||||||||| Sbjct 88456 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 88410 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | ||| | || || || ||||| ||||| || | | Sbjct 81587 CCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGAC 81528 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || |||||||| ||||| || || || | ||||||||||| | || Sbjct 81527 AATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGG 81468 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || ||||| ||||| | | | | |||||| | |||||| Sbjct 81467 ATTCCTTCCTTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACC 81408 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || || ||||| |||||||| ||||||||||| Sbjct 81407 TCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | ||| | || || || ||||| ||||| || | | Sbjct 88408 CCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGAC 88349 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || |||||||| ||||| || || || | ||||||||||| | || Sbjct 88348 AATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGG 88289 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || ||||| ||||| | | | | |||||| | |||||| Sbjct 88288 ATTCCTTCCTTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACC 88229 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || || ||||| |||||||| ||||||||||| Sbjct 88228 TCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | | |||||| | || | ||| || || || |||||||| || | Sbjct 89094 TTCCTCCACGAAGACGCAACACAAGGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCAG 89035 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || | | || ||||||||||| || || || || | ||||||||||| | | Sbjct 89034 ACAGTGTCCTTCCATCCTCCAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTG 88975 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | ||||||||| ||||| ||||| | | | |||||| | ||| | Sbjct 88974 GGATTCCCTCCTTGTCTTGAATCTTAGCCTTCACGTTCTCAATCGTGTCAGAGGGTTCAA 88915 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| ||||| || |||| |||||| || || || ||||||| Sbjct 88914 CTTCCAATGTGATGGTTTTGCCGGTCAGAGTTTTTACGAAGATTTGCATTC 88864 >seq1320 Length=267419 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||||||||| | | || ||||| ||| | || |||||| || || || || |||| Sbjct 96570 TCCACCACGGAGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGA 96511 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 || || || |||| |||| |||||| || || || |||| ||||||||||| | || Sbjct 96510 CAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGG 96451 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | |||||| ||| ||| || ||||| | | | | ||||| | || || Sbjct 96450 AATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGAC 96391 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | ||||| || || || |||| || ||||| || |||||||||| Sbjct 96390 TTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATTC 96341 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || || || |||| || || || |||| |||| |||||| || || || Sbjct 95621 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 95562 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | | Sbjct 95561 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 95502 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || || || | ||||| || || || |||| ||||||||| Sbjct 95501 TCAATGGTGTCAGAAGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACA 95442 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 95441 AAAATCTGCATT 95430 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || || || |||| || || || |||| |||| |||||| || || || Sbjct 95849 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 95790 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | | Sbjct 95789 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 95730 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || || || | ||||| || || || |||| || ||||| Sbjct 95729 TCAATGGTGTCAGATGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 95670 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 95669 AAAATCTGCATTC 95657 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || || || |||| || || || |||| |||| |||||| || || || Sbjct 96077 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 96018 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | | Sbjct 96017 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 95958 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || || || | ||||| || || || |||| || ||||| Sbjct 95957 TCAATGGTGTCAGAAGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 95898 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 95897 AAAATCTGCATTC 95885 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || || || || |||| || || || |||| |||| |||||| || || || Sbjct 96305 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 96246 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | | Sbjct 96245 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 96186 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | || || || | ||||| || || || |||| || ||||| Sbjct 96185 TCAATGGTGTCAGAAGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 96126 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 96125 AAAATCTGCATTC 96113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450531249394640