Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 141 8e-29
seq1320 95.1 1e-14
>seq1095
Length=312686
Score = 141 bits (156), Expect = 8e-29
Identities = 171/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| ||||| ||||||| |||||| || | || |||||| || |||||||| || |
Sbjct 84695 TTCCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 84636
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| ||||| | || || |||||||| || ||||| || | | ||||||||| | |
Sbjct 84635 ACAGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTG 84576
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| | ||||||||| |||||| ||| | | | | | |||||| || ||||
Sbjct 84575 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCA 84516
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|||||| ||| || || || || ||||| ||||||||||| ||||||||| ||
Sbjct 84515 CCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTTG 84463
Score = 114 bits (126), Expect = 1e-20
Identities = 143/195 (73%), Gaps = 1/195 (1%)
Strand=Plus/Minus
Query 35547 CCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||||| | || || |||||||| || |||||
Sbjct 78074 CCTTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAA 78015
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | | ||||||||| | |||| | ||||||||| |||||| ||| | | |
Sbjct 78014 ATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTC 77955
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||| || |||||||||| ||| || || || || ||||| |||||||||
Sbjct 77954 TCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACA 77895
Query 35726 AATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 77894 AAGATCTGCATTTTG 77880
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| || ||||| ||||| || | || ||||||||||||||||| || |
Sbjct 81815 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 81756
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || ||||| || | ||||||||||| | ||
Sbjct 81755 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 81696
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | || ||| | ||| ||
Sbjct 81695 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 81636
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || || |||| |||||| || |||||||||||
Sbjct 81635 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 81589
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| || ||||| ||||| || | || ||||||||||||||||| || |
Sbjct 88636 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 88577
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || ||||| || | ||||||||||| | ||
Sbjct 88576 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 88517
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | || ||| | ||| ||
Sbjct 88516 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 88457
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || || |||| |||||| || |||||||||||
Sbjct 88456 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 88410
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | |||||| | ||| | || || || ||||| ||||| || | |
Sbjct 81587 CCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGAC 81528
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || | | || |||||||| ||||| || || || | ||||||||||| | ||
Sbjct 81527 AATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGG 81468
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| || ||||| ||||| | | | | |||||| | ||||||
Sbjct 81467 ATTCCTTCCTTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACC 81408
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || || || || ||||| |||||||| |||||||||||
Sbjct 81407 TCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | |||||| | ||| | || || || ||||| ||||| || | |
Sbjct 88408 CCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGAC 88349
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || | | || |||||||| ||||| || || || | ||||||||||| | ||
Sbjct 88348 AATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGG 88289
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| || ||||| ||||| | | | | |||||| | ||||||
Sbjct 88288 ATTCCTTCCTTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACC 88229
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || || || || ||||| |||||||| |||||||||||
Sbjct 88228 TCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| ||||| | | |||||| | || | ||| || || || |||||||| || |
Sbjct 89094 TTCCTCCACGAAGACGCAACACAAGGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCAG 89035
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || | | || ||||||||||| || || || || | ||||||||||| | |
Sbjct 89034 ACAGTGTCCTTCCATCCTCCAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTG 88975
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
| | | ||||||||| ||||| ||||| | | | |||||| | ||| |
Sbjct 88974 GGATTCCCTCCTTGTCTTGAATCTTAGCCTTCACGTTCTCAATCGTGTCAGAGGGTTCAA 88915
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
| |||| ||||| ||||| || |||| |||||| || || || |||||||
Sbjct 88914 CTTCCAATGTGATGGTTTTGCCGGTCAGAGTTTTTACGAAGATTTGCATTC 88864
>seq1320
Length=267419
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||||||||| | | || ||||| ||| | || |||||| || || || || ||||
Sbjct 96570 TCCACCACGGAGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGA 96511
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
|| || || |||| |||| |||||| || || || |||| ||||||||||| | ||
Sbjct 96510 CAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGG 96451
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| | |||||| ||| ||| || ||||| | | | | ||||| | || ||
Sbjct 96450 AATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGAC 96391
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| | ||||| || || || |||| || ||||| || ||||||||||
Sbjct 96390 TTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATTC 96341
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || || || || |||| || || || |||| |||| |||||| || || ||
Sbjct 95621 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 95562
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | |
Sbjct 95561 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 95502
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| | || || || | ||||| || || || |||| |||||||||
Sbjct 95501 TCAATGGTGTCAGAAGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACA 95442
Query 35726 AATATCTGCATT 35737
|| |||||||||
Sbjct 95441 AAAATCTGCATT 95430
Score = 82.4 bits (90), Expect = 7e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || || || || |||| || || || |||| |||| |||||| || || ||
Sbjct 95849 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 95790
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | |
Sbjct 95789 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 95730
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| | || || || | ||||| || || || |||| || |||||
Sbjct 95729 TCAATGGTGTCAGATGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 95670
Query 35726 AATATCTGCATTC 35738
|| ||||||||||
Sbjct 95669 AAAATCTGCATTC 95657
Score = 82.4 bits (90), Expect = 7e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || || || || |||| || || || |||| |||| |||||| || || ||
Sbjct 96077 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 96018
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | |
Sbjct 96017 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 95958
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| | || || || | ||||| || || || |||| || |||||
Sbjct 95957 TCAATGGTGTCAGAAGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 95898
Query 35726 AATATCTGCATTC 35738
|| ||||||||||
Sbjct 95897 AAAATCTGCATTC 95885
Score = 82.4 bits (90), Expect = 7e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || || || || |||| || || || |||| |||| |||||| || || ||
Sbjct 96305 TCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAG 96246
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | |||| | |||||| ||| ||| || ||||| | |
Sbjct 96245 ATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTC 96186
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| | || || || | ||||| || || || |||| || |||||
Sbjct 96185 TCAATGGTGTCAGAAGGCTCGACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 96126
Query 35726 AATATCTGCATTC 35738
|| ||||||||||
Sbjct 96125 AAAATCTGCATTC 96113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450531249394640
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