Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq738 343 2e-89
seq2120 159 5e-34
seq412 100 4e-16
>seq738
Length=407637
Score = 343 bits (380), Expect = 2e-89
Identities = 1032/1565 (66%), Gaps = 76/1565 (5%)
Strand=Plus/Plus
Query 68716 ATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACA 68775
|| ||||| | |||||||| || | || |||||||| || |||||| |
Sbjct 383160 ATCTGAAACTGACCAGATAAAACCTGTCTTGTATAAATATTTGAAGTTATTGGTTCAATT 383219
Query 68776 GATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAA 68835
||||||| ||| || | |||||| | ||| ||||| || ||||| |||| | |||| |
Sbjct 383220 GATTCATAATTGCCTAAAATTTGTGAAGTGGATGCGGTAGGCATTTGTGCAATTAATAGA 383279
Query 68836 CTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCA 68895
|||| || |||| | | |||| | | ||| |||| | |||||| || |
Sbjct 383280 GAGTTTCGAATTCCATATTTACTGATATCTTTTTTCAGATTATCCCAATCAAGAAACTGG 383339
Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT---TGCA-TATGATCC 68951
|| ||| |||||| ||||| || || | || || || || || | || ||
Sbjct 383340 GAGGGTTGTTTATTCCATAGATCATACTGCAAAAAGCCCTTGCTGAGTGGACTA----CC 383395
Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTA---ATGC 69008
| |||| | ||| |||| || | | ||| |||||||| ||||| || | ||||
Sbjct 383396 AATATAACTGGGATATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGC 383455
Query 69009 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAA 69068
| ||||| | ||||| || || |||||||| | | | |||| ||| | |
Sbjct 383456 A---TAATAGAGAGTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATA 383512
Query 69069 TGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128
||| | ||||| || ||| ||| || || ||||||| || || || ||||||||
Sbjct 383513 TGGTATTTTTAAAATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCT 383572
Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188
|| | | ||||||||| ||| | |||| || | ||||||||| ||||| || | |||
Sbjct 383573 ATTTTTTTTATTTGAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTT 383632
Query 69189 ATTAAGATTTCGGACTACTACTTT---AACCACGTCCTTTAGTTTGAGAAAATCAAATCG 69245
||| |||||| | || ||||| |||| ||| | | ||| ||||||||||
Sbjct 383633 ATTTAGATTTTGTGTAACAACTTTTGTAACCT-GTC--TCAATTTATAAAAATCAAATAC 383689
Query 69246 TCCATCTAT---AAC---AAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTAC 69299
||| | ||| ||| |||| | ||||| || || |||||||| ||||| |
Sbjct 383690 ATTATCATTGGGAACTATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAAT 383749
Query 69300 CTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356
|||| | || || | |||||| || || ||||||| ||||| ||||| || ||
Sbjct 383750 TTCATCTTTTGA---TGAAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGT 383806
Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416
|||| ||| || ||| |||| | ||| ||||| ||| || | | | ||
Sbjct 383807 TCCCAAATTAATTTGGTTAGACTTTCTATTAATACTATCCTT--AAATAACATATAGGGT 383864
Query 69417 A--CCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGA--CCCTAGCATTTATT 69471
| ||||||||||| ||| || || || |||| ||| | | || |||| ||||
Sbjct 383865 AATCCAGTTTCAATTTGACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATT 383921
Query 69472 ACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCC 69531
| || | ||| |||| |||||||||| |||||| ||| || |||| |||
Sbjct 383922 TGTTCCAAATATCTCTTTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCC 383981
Query 69532 CAAACATC--ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCAT 69589
||||| || || | | ||||||| |||||||||||| || ||| | |||| ||
Sbjct 383982 CAAACGTCTGATAGATTT--GGACATTGATTTGGACACATTAAACTCCAAATTTCATTAT 384039
Query 69590 CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTT 69648
| || | |||||||||||| | | ||||||| | ||| || | |||||| | |
Sbjct 384040 TTTCCACCCTAGACATAAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCT 384098
Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708
||| ||| ||||| || |||||||||| | || | ||| | || ||||||| ||||
Sbjct 384099 CTAAGTTCATCATTGCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGC 384158
Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768
|||| |||| ||| || || ||| | || ||||| || ||||||||||| | ||
Sbjct 384159 CATGACTCTAAATAGATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAAT 384215
Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828
|| ||| | ||||| | | | | | | ||| | |||||| || |||
Sbjct 384216 CTCACAGAGCTATTAAATAAACGAATTGTAGAAATTAGACCATTTGA--AACC------- 384266
Query 69829 CCAG---AAA---TATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCT 69882
|||| ||| ||| | | || |||| ||| | | || || ||| |||||
Sbjct 384267 CCAGGATAAATTTTATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCA 384326
Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942
|| ||| ||||| |||| ||||||| ||| | ||| ||||| ||| || || |
Sbjct 384327 CCCATCATATTAGATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAA 384386
Query 69943 TCATCTATC--ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000
||| || || | ||||| || |||||| || | || ||| || ||| ||| | ||||
Sbjct 384387 TCA-CTTTCCAAAGTTAATAA-AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCAT 384444
Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060
| | || |||||||| ||| |||||| | |||||| || || |||| || |||||
Sbjct 384445 TTATTAGTGTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTC 384504
Query 70061 TAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120
| | || |||| || || | || || || | ||| |||||||| ||||
Sbjct 384505 TTATTTTGTCAATATTGTTACCATTTATACTTACCGATACTCTCATAAACATATGTTGAG 384564
Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180
||| ||| | | ||||| ||||||| ||||||||| |||| | |||||| | |
Sbjct 384565 GTCTTTCAATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATC 384624
Query 70181 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACA--GAATTTAGTTTATCCTT 70238
||||||| | || | | ||||| || ||| | ||||| ||||||| || ||| |
Sbjct 384625 CAAAATATGTAAATTCATAATCTCTATCATAATT--TAACATGGAATTTATTTGATC--T 384680
Query 70239 ATATT 70243
|||||
Sbjct 384681 ATATT 384685
Score = 324 bits (358), Expect = 2e-83
Identities = 602/877 (69%), Gaps = 14/877 (2%)
Strand=Plus/Plus
Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384
|||||| ||||||| || | || || || ||||| || || |||||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444
||||||||||| || |||||| |||| || | ||| | |||| | ||| |
Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418
Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504
|||||||| ||||||||| ||| || | |||| | ||||||| |||| |
Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478
Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
|| ||| |||| | ||| || ||||| ||| ||| || || || || || ||||||
Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538
Query 39565 CGATGTTACTACCTC---ATCACTCGGTGGATGCAATAAATGTTTAAACATTAAG---CA 39618
|| || |||| |||| | ||| ||||| ||| |||| ||
Sbjct 114539 TGAA--TAA-ACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACA 114595
Query 39619 GGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCC 39678
|| || |||||||||| | ||||||||||||| || | ||| ||| || || | ||
Sbjct 114596 TGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACC 114655
Query 39679 AGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGAT 39738
||||| | | ||||||||| | ||||||||| || |||||| ||||| ||||| ||
Sbjct 114656 TGGCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAAT 114715
Query 39739 GCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTAT 39795
||||| || ||||||| || || | || |||| || |||||| || || || |||
Sbjct 114716 CCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATAT 114775
Query 39796 CCACTTCTGTGCCCA-ATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 39854
| || | |||||| || |||| ||||| | |||| || || ||||| || ||||
Sbjct 114776 ATATTTATTTGCCCATATTCCCTTTTTTCTT-ATTGAAGGGATGGTCTCTATTGCGTTAA 114834
Query 39855 AGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTT 39914
| |||| || || | ||| || || | | || |||| ||| | |||||||| |
Sbjct 114835 AAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCT 114894
Query 39915 CTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTT 39974
||||||| || ||||| || | | ||||| | ||| ||| |||| |||||| | ||||
Sbjct 114895 CTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTT 114954
Query 39975 GTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAA 40034
|||| ||| | |||||||| |||||| ||| || ||| ||| | ||||
Sbjct 114955 GTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCAA 115014
Query 40035 AAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCAT 40094
||||||| | | |||| ||||||| ||||||||| | ||||| || ||||| | |
Sbjct 115015 AAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAG 115074
Query 40095 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGT 40154
| ||||| || |||| ||| || ||||| | |||||||| || || | | | ||| |
Sbjct 115075 TAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTAT 115134
Query 40155 ACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
|| ||| ||||||||| | ||| ||||||||| ||
Sbjct 115135 ACTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171
>seq2120
Length=154726
Score = 159 bits (176), Expect = 5e-34
Identities = 247/353 (70%), Gaps = 0/353 (0%)
Strand=Plus/Minus
Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898
|| ||||| || ||||| |||| || || | ||| || || | | || |||| |
Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062
Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958
|| | |||||||| |||||||| || ||||| || | | ||||| | ||| ||| ||
Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002
Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018
|| |||||| | |||||||| ||| | |||||||| |||||| ||| || |||
Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942
Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078
||| | ||||||||||| | | |||| ||||||| ||||||||| | ||||
Sbjct 145941 GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTC 145882
Query 40079 AATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138
| || ||||| | | | ||||| || |||| ||| || ||||| | ||||| || ||
Sbjct 145881 AGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGAT 145822
Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
|| | | | ||| ||| ||| ||||||||| | ||| ||||| ||| ||
Sbjct 145821 GCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGAAAATAT 145769
>seq412
Length=567167
Score = 100 bits (110), Expect = 4e-16
Identities = 131/180 (73%), Gaps = 5/180 (3%)
Strand=Plus/Plus
Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727
|| ||||| |||||||| ||||||||||| || ||||| ||||||| ||||| ||
Sbjct 173441 AAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATGGACGCAAAGCTGCCC 173500
Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT----GT 39783
|| ||||||||||| || || || || || || |||| || ||| ||| ||| | ||
Sbjct 173501 GAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCGCCG-AACGTGGCCGT 173559
Query 39784 ATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843
| | ||||||| | ||||| || || ||| |||| ||||| |||||||| ||
Sbjct 173560 TTGGCTGGCGATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAACACACGGCATTGTCTC 173619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686509036251120
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