Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq738 343 2e-89 seq2120 159 5e-34 seq412 100 4e-16 >seq738 Length=407637 Score = 343 bits (380), Expect = 2e-89 Identities = 1032/1565 (66%), Gaps = 76/1565 (5%) Strand=Plus/Plus Query 68716 ATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACA 68775 || ||||| | |||||||| || | || |||||||| || |||||| | Sbjct 383160 ATCTGAAACTGACCAGATAAAACCTGTCTTGTATAAATATTTGAAGTTATTGGTTCAATT 383219 Query 68776 GATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAA 68835 ||||||| ||| || | |||||| | ||| ||||| || ||||| |||| | |||| | Sbjct 383220 GATTCATAATTGCCTAAAATTTGTGAAGTGGATGCGGTAGGCATTTGTGCAATTAATAGA 383279 Query 68836 CTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCA 68895 |||| || |||| | | |||| | | ||| |||| | |||||| || | Sbjct 383280 GAGTTTCGAATTCCATATTTACTGATATCTTTTTTCAGATTATCCCAATCAAGAAACTGG 383339 Query 68896 GATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT---TGCA-TATGATCC 68951 || ||| |||||| ||||| || || | || || || || || | || || Sbjct 383340 GAGGGTTGTTTATTCCATAGATCATACTGCAAAAAGCCCTTGCTGAGTGGACTA----CC 383395 Query 68952 ATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTA---ATGC 69008 | |||| | ||| |||| || | | ||| |||||||| ||||| || | |||| Sbjct 383396 AATATAACTGGGATATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGC 383455 Query 69009 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAA 69068 | ||||| | ||||| || || |||||||| | | | |||| ||| | | Sbjct 383456 A---TAATAGAGAGTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATA 383512 Query 69069 TGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 ||| | ||||| || ||| ||| || || ||||||| || || || |||||||| Sbjct 383513 TGGTATTTTTAAAATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCT 383572 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 || | | ||||||||| ||| | |||| || | ||||||||| ||||| || | ||| Sbjct 383573 ATTTTTTTTATTTGAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTT 383632 Query 69189 ATTAAGATTTCGGACTACTACTTT---AACCACGTCCTTTAGTTTGAGAAAATCAAATCG 69245 ||| |||||| | || ||||| |||| ||| | | ||| |||||||||| Sbjct 383633 ATTTAGATTTTGTGTAACAACTTTTGTAACCT-GTC--TCAATTTATAAAAATCAAATAC 383689 Query 69246 TCCATCTAT---AAC---AAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTAC 69299 ||| | ||| ||| |||| | ||||| || || |||||||| ||||| | Sbjct 383690 ATTATCATTGGGAACTATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAAT 383749 Query 69300 CTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356 |||| | || || | |||||| || || ||||||| ||||| ||||| || || Sbjct 383750 TTCATCTTTTGA---TGAAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGT 383806 Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416 |||| ||| || ||| |||| | ||| ||||| ||| || | | | || Sbjct 383807 TCCCAAATTAATTTGGTTAGACTTTCTATTAATACTATCCTT--AAATAACATATAGGGT 383864 Query 69417 A--CCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGA--CCCTAGCATTTATT 69471 | ||||||||||| ||| || || || |||| ||| | | || |||| |||| Sbjct 383865 AATCCAGTTTCAATTTGACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATT 383921 Query 69472 ACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCC 69531 | || | ||| |||| |||||||||| |||||| ||| || |||| ||| Sbjct 383922 TGTTCCAAATATCTCTTTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCC 383981 Query 69532 CAAACATC--ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCAT 69589 ||||| || || | | ||||||| |||||||||||| || ||| | |||| || Sbjct 383982 CAAACGTCTGATAGATTT--GGACATTGATTTGGACACATTAAACTCCAAATTTCATTAT 384039 Query 69590 CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTT 69648 | || | |||||||||||| | | ||||||| | ||| || | |||||| | | Sbjct 384040 TTTCCACCCTAGACATAAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCT 384098 Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708 ||| ||| ||||| || |||||||||| | || | ||| | || ||||||| |||| Sbjct 384099 CTAAGTTCATCATTGCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGC 384158 Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768 |||| |||| ||| || || ||| | || ||||| || ||||||||||| | || Sbjct 384159 CATGACTCTAAATAGATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAAT 384215 Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828 || ||| | ||||| | | | | | | ||| | |||||| || ||| Sbjct 384216 CTCACAGAGCTATTAAATAAACGAATTGTAGAAATTAGACCATTTGA--AACC------- 384266 Query 69829 CCAG---AAA---TATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCT 69882 |||| ||| ||| | | || |||| ||| | | || || ||| ||||| Sbjct 384267 CCAGGATAAATTTTATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCA 384326 Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942 || ||| ||||| |||| ||||||| ||| | ||| ||||| ||| || || | Sbjct 384327 CCCATCATATTAGATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAA 384386 Query 69943 TCATCTATC--ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 ||| || || | ||||| || |||||| || | || ||| || ||| ||| | |||| Sbjct 384387 TCA-CTTTCCAAAGTTAATAA-AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCAT 384444 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | | || |||||||| ||| |||||| | |||||| || || |||| || ||||| Sbjct 384445 TTATTAGTGTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTC 384504 Query 70061 TAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120 | | || |||| || || | || || || | ||| |||||||| |||| Sbjct 384505 TTATTTTGTCAATATTGTTACCATTTATACTTACCGATACTCTCATAAACATATGTTGAG 384564 Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180 ||| ||| | | ||||| ||||||| ||||||||| |||| | |||||| | | Sbjct 384565 GTCTTTCAATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATC 384624 Query 70181 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACA--GAATTTAGTTTATCCTT 70238 ||||||| | || | | ||||| || ||| | ||||| ||||||| || ||| | Sbjct 384625 CAAAATATGTAAATTCATAATCTCTATCATAATT--TAACATGGAATTTATTTGATC--T 384680 Query 70239 ATATT 70243 ||||| Sbjct 384681 ATATT 384685 Score = 324 bits (358), Expect = 2e-83 Identities = 602/877 (69%), Gaps = 14/877 (2%) Strand=Plus/Plus Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384 |||||| ||||||| || | || || || ||||| || || |||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444 ||||||||||| || |||||| |||| || | ||| | |||| | ||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 |||||||| ||||||||| ||| || | |||| | ||||||| |||| | Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || ||| |||| | ||| || ||||| ||| ||| || || || || || |||||| Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538 Query 39565 CGATGTTACTACCTC---ATCACTCGGTGGATGCAATAAATGTTTAAACATTAAG---CA 39618 || || |||| |||| | ||| ||||| ||| |||| || Sbjct 114539 TGAA--TAA-ACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACA 114595 Query 39619 GGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCC 39678 || || |||||||||| | ||||||||||||| || | ||| ||| || || | || Sbjct 114596 TGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACC 114655 Query 39679 AGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGAT 39738 ||||| | | ||||||||| | ||||||||| || |||||| ||||| ||||| || Sbjct 114656 TGGCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAAT 114715 Query 39739 GCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTAT 39795 ||||| || ||||||| || || | || |||| || |||||| || || || ||| Sbjct 114716 CCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATAT 114775 Query 39796 CCACTTCTGTGCCCA-ATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 39854 | || | |||||| || |||| ||||| | |||| || || ||||| || |||| Sbjct 114776 ATATTTATTTGCCCATATTCCCTTTTTTCTT-ATTGAAGGGATGGTCTCTATTGCGTTAA 114834 Query 39855 AGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTT 39914 | |||| || || | ||| || || | | || |||| ||| | |||||||| | Sbjct 114835 AAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCT 114894 Query 39915 CTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTT 39974 ||||||| || ||||| || | | ||||| | ||| ||| |||| |||||| | |||| Sbjct 114895 CTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTT 114954 Query 39975 GTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAA 40034 |||| ||| | |||||||| |||||| ||| || ||| ||| | |||| Sbjct 114955 GTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCAA 115014 Query 40035 AAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCAT 40094 ||||||| | | |||| ||||||| ||||||||| | ||||| || ||||| | | Sbjct 115015 AAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAG 115074 Query 40095 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGT 40154 | ||||| || |||| ||| || ||||| | |||||||| || || | | | ||| | Sbjct 115075 TAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTAT 115134 Query 40155 ACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191 || ||| ||||||||| | ||| ||||||||| || Sbjct 115135 ACTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171 >seq2120 Length=154726 Score = 159 bits (176), Expect = 5e-34 Identities = 247/353 (70%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 || ||||| || ||||| |||| || || | ||| || || | | || |||| | Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 || | |||||||| |||||||| || ||||| || | | ||||| | ||| ||| || Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 || |||||| | |||||||| ||| | |||||||| |||||| ||| || ||| Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078 ||| | ||||||||||| | | |||| ||||||| ||||||||| | |||| Sbjct 145941 GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTC 145882 Query 40079 AATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 | || ||||| | | | ||||| || |||| ||| || ||||| | ||||| || || Sbjct 145881 AGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGAT 145822 Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191 || | | | ||| ||| ||| ||||||||| | ||| ||||| ||| || Sbjct 145821 GCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGAAAATAT 145769 >seq412 Length=567167 Score = 100 bits (110), Expect = 4e-16 Identities = 131/180 (73%), Gaps = 5/180 (3%) Strand=Plus/Plus Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || ||||| |||||||| ||||||||||| || ||||| ||||||| ||||| || Sbjct 173441 AAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATGGACGCAAAGCTGCCC 173500 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT----GT 39783 || ||||||||||| || || || || || || |||| || ||| ||| ||| | || Sbjct 173501 GAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCGCCG-AACGTGGCCGT 173559 Query 39784 ATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843 | | ||||||| | ||||| || || ||| |||| ||||| |||||||| || Sbjct 173560 TTGGCTGGCGATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAACACACGGCATTGTCTC 173619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686509036251120