Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_027341.1 Length=130008 Score E Sequences producing significant alignments: (Bits) Value seq13085 289 2e-73 seq10675 181 9e-41 >seq13085 Length=1678 Score = 289 bits (320), Expect = 2e-73 Identities = 251/316 (79%), Gaps = 44/316 (14%) Strand=Plus/Plus Query 52018 TGGCATATAATAACAGGATATAGTGTTAATGGTAGCATGCGTGTTTTGGGAACATGTAGT 52077 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1336 TGGCATATAGTAACAGGATATAGTGTTAATGGTAGCATGCGTGTTTTGGGAACATGTAGT 1395 Query 52078 GTTGGTTCGAGTCCAGCTATCCTGATGAGTGGTGTATAGTCCATATATGAAGTGCTAAGC 52137 ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct 1396 GTTGGTTCGAGTCCAGCTATCCTGATGAGTGGTGTATAGTCCATAGACGAAGTGTTAAGC 1455 Query 52138 TATTGCGCAGTACCTTGGCACAACTATACAAGAACCATATTGAACATAACTGGTGCATGG 52197 || |||||||||||||| | |||||||||||| || Sbjct 1456 TA-------------TGGCACAACTATAC--------------AGATAACTGGTGCACGG 1488 Query 52198 TTATTAGGATATGGGGTCAGTTAACGGAAGACCTAGTGTATTAAAGTGTCACAGGCTCAA 52257 |||| |||| ||||| ||| ||||||||||||||||||||||||| || Sbjct 1489 TTAT-----------ATCAGCTAACGAAAGTCCTAGTGTATTAAAGTGTCACAGGCATAA 1537 Query 52258 TTAAGTGACAGCTGGTTAGAGTAATTGGAGGGATACGGATAGCAACCGTGTAGGGCTCGA 52317 |||||||||||||||||||||||| ||| ||| || | |||||||| |||| Sbjct 1538 CTAAGTGACAGCTGGTTAGAGTAAT--AAGGTGTAC---TAAC-GTGGTGTAGGGTTCGA 1591 Query 52318 TTCCCTACTGCTCTAT 52333 |||||||||||||||| Sbjct 1592 TTCCCTACTGCTCTAT 1607 >seq10675 Length=2892 Score = 181 bits (200), Expect = 9e-41 Identities = 135/154 (88%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 27237 CAATTAAAAGCAGaaatcaataaaaaa-tatcacttaatgcttgataaaaa-aataatat 27294 |||||||||| |||||| ||||||||| ||||| |||| |||| || | ||| | || Sbjct 377 CAATTAAAAGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAACGATAATTA-AT 435 Query 27295 tttgatataataatatatatagaaataaaGGAGAACTAACACATGGTAGTTAAATTAACA 27354 |||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 436 TTTGGTATAATAGTATATATAGAAATAAAGGAGAACTAACAAATGGTAGTCAAATTAACG 495 Query 27355 CAAAAACAAGCTGATTATCTTAAAACTTTTGGAA 27388 ||||||||||||||||||||| |||||||||||| Sbjct 496 CAAAAACAAGCTGATTATCTTGAAACTTTTGGAA 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415664807228622