Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_027382.1 Length=37146 Score E Sequences producing significant alignments: (Bits) Value seq1173 95.1 3e-15 >seq1173 Length=295699 Score = 95.1 bits (104), Expect = 3e-15 Identities = 191/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 35674 CTTCAAAAAGGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGCGAAGCATGAAA 35733 |||| | | || || || |||||||| |||||||| ||||| || || || ||| | ||| Sbjct 93607 CTTCGAGAGGGCGATACGCTGGTTGTATGGAAACTCGATCGTCTGGGTCGTAGCGTAAAA 93548 Query 35734 CATTTGATTTCTCTCGTAGGGGAATTACGAGAGCGAGGGATTAATTTTCGCAGTCTTACT 35793 || | || | ||| || || | | | | || ||| | || ||||| || Sbjct 93547 CAGCTTGTTGATATCGCTGGAGAGCTGCACAAACAGGGCATTCAGTTCAAAAGTCTCACG 93488 Query 35794 GACAGTATTGATACGTCATCTCCAATGGGGCGTTTTTTCTTCCACGTTATGGGTGCCCTG 35853 || ||||||||| | | || |||||||||||||||||| ||||||| | ||| Sbjct 93487 GATGCTATTGATACCGGAACACCGTCGGGGCGTTTTTTCTTCCATGTTATGGCTAGCCTT 93428 Query 35854 GCTGAGATGGAACGAGAACTAATCATCGAGAGAACGATGGCTGGACTTGCTGCTGC-CAG 35912 || || ||||| ||||| | || ||||| | ||| ||| || |||| | | || || Sbjct 93427 GCAGAAATGGAGCGAGAGTTGATAATCGAACGTACGCGGGCAGGTCTTGATTCAGCAAAG 93368 Query 35913 AAATAAAGGCCGTATCGGTGGGCGACCACCTAAACTAACCA 35953 ||| || |||| |||||| || ||| ||| | |||| Sbjct 93367 GAAT-TCGGGCGTAAAGGTGGGAGAAAACCAAAAATGACCA 93328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118679948377968