Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq738 168 5e-37
>seq738
Length=407637
Score = 168 bits (186), Expect = 5e-37
Identities = 581/884 (66%), Gaps = 39/884 (4%)
Strand=Plus/Minus
Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768
|||||||| ||| | || |||||| | | ||| ||| || | || || ||||||
Sbjct 115168 TTTCCAATATTATACCCCGATATATGGTACAAGTATAAACAATCTGTAGCATCTTTTTGG 115109
Query 43769 ACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA 43828
|| ||||||| || ||| | |||| || | | ||||||| | | | || |
Sbjct 115108 ACCACAGAAGAGGTCGATCTATCTAAGGATATTACTCATTGGAAGAAGCTGACATCAGAT 115049
Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888
||||||||||||||||| || | || ||||||||| | || || || |
Sbjct 115048 GAAAAACATTTTATATCACATATTCTTGCATTTTTTGCTTCATCAGATACAATTGTTGGT 114989
Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948
|| |||||| || | || |||||||| ||| | ||||| ||| ||| ||
Sbjct 114988 GATAATTTGATTGAAAGATTCATTCAAGAAGTACAAATCATTGAAGCTAGATTTTTCTAC 114929
Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGAT-AGATAC 44007
| |||||| | | || |||||||| ||||| || ||||| || ||| | || ||| ||
Sbjct 114928 AGTTTTCAATTAACTATGGAAAATATACATTCAGAGATGTATAG-CTTATTATTAGAAAC 114870
Query 44008 GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGC 44067
| ||| || | | ||||| ||| | ||||| || ||||| || | ||| |
Sbjct 114869 TTTCATAGAATCTACAGATCAGAAGAATCATCTTTTTAACGCAATAGAGACCATCCCTTC 114810
Query 44068 GATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT--TCAAATGATTC---TTTT 44122
|| | | | || | | ||||| ||||| ||| || ||||| |||| |||
Sbjct 114809 AATAAGAAAAAAGGGAATATGGGCAAATAAATATATATATGATCAAA--ATTCAAGTTTC 114752
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
| ||| ||| | || ||||||||||| || ||||| |||||||| || || |||||
Sbjct 114751 GCAGAGCGATTGGTAGCGTTTGCAGTGGTTGAAGGGATTTTCTTCTCTGGGAGTTTTGCA 114692
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA--AATGAGT 44240
|| ||||||||||| || || || | | ||||| || || || ||||| |||||
Sbjct 114691 GCAATATTTTGGTTGAAAAAGCGTAATATTATGCCAGGTTTAAC--TTTCAGTAATGAAC 114634
Query 44241 TAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA-CTTGGATATCTA 44299
| |||||| | ||||| | ||||||||| || ||||| || | ||| | ||| || |
Sbjct 114633 TTATAAGTAGAGATGAGGCCTTACATTGTGAATTTGCATGTCTCTTATATAGGAAATATT 114574
Query 44300 GGAGACGATAAGCCTTCATGTAAGACAA----TTA--CAGATATTGTTGTAGAGGCAGTA 44353
| || |||| | || | | ||| ||| || ||| | | || |||||
Sbjct 114573 TAAAAC-ATAA---ATTATCTGATTCAAAGGTTTATTCA-ATAATACAG--GAAGCAGTT 114521
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGT--AAATTTAATAGGAATGAA-T 44410
| || ||| ||||||| ||||| ||||||| || |||||| |||| |||| |
Sbjct 114520 GATATTGAAGGAGAATTTCTGACAGAGTCATTACCCGTTGAAATTT--TAGGTTTGAATT 114463
Query 44411 GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470
| | | | |||| | ||||| || |||| ||| | ||| | | ||||| ||
Sbjct 114462 GCTCATCT-ATGATTAATTATATAAGATTTGTTGCTGATAGATTATTAATTGAACTTGGA 114404
Query 44471 TGCGAT--AAACA-CTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
| || ||| | || | ||| || || || || ||||| ||||| |||||||| |||
Sbjct 114403 T---ATTCAAAGATTTACAATGTTCATAATCCTTTGGATTTCATGGATAATATTTCATTG 114347
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571
|| ||||| || |||||||| | || | ||||||||
Sbjct 114346 ATTAATAAGACAAATTTCTTTGAAAAGAGGGTGAGTGAATATCA 114303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397230473280790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |