Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq293 91.5 5e-13 seq738 84.2 7e-11 >seq293 Length=664131 Score = 91.5 bits (100), Expect = 5e-13 Identities = 164/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTA 255097 || ||||| |||||| | ||||||||||||||||||||||| ||| || | ||| | Sbjct 205718 CGTCCAGGCGCGTTCGCGATCTACCTGGAGCCGTGGCACGCGGACGTTTACGAGTTCCTG 205659 Query 255098 CTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 ||| | || || || | |||||| || || ||||| | | | ||| | Sbjct 205658 GACCTGAAGAAGAACACTGGAAAAGAGGAGGTGCGAGCTCGCGATTTGTTCTACGCACTG 205599 Query 255158 TGG-TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTG 255216 ||| ||| ||| ||||| |||||||| || || ||| | | |||||||||||||| Sbjct 205598 TGGGTGCC-CGACCTGTTCATGCGACGAGTCGAGGCTGACCAAATGTGGAGCCTCATGTG 205540 Query 255217 TCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTA 255273 ||| || | |||||||| ||| ||||||||| || || || ||||| || Sbjct 205539 TCCGCACGACTGTCCCGGTCTCTCCGATGTTTGGGGTGAAGAATTCGAGAAACTCTA 205483 >seq738 Length=407637 Score = 84.2 bits (92), Expect = 7e-11 Identities = 125/176 (71%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 443689 AAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748 ||||| || |||| |||||| | || || ||||| ||||| ||||| | || || Sbjct 114765 AAAATTCAAGTTTCGCAGAGCGATTGGTAGCGTTTGCAGTGGTTGAAGGGATTTTCTTCT 114706 Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808 || || ||| || | || || ||||||||||||||| |||||| ||| | || Sbjct 114705 CTGGGAGTTTT-GCAGCAATATTTTGGTTGAAAAAGCGTAATATTATGCCAGGTTTAACT 114647 Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 || ||||| ||||| || ||| | || |||| || ||||| || || || ||||| Sbjct 114646 TTCAGTAATGAACTTATAAGTAGAGATGAGGCCTTACATTGTGAATTTGCATGTCT 114591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587388518860310