Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq293 91.5 5e-13
seq738 84.2 7e-11
>seq293
Length=664131
Score = 91.5 bits (100), Expect = 5e-13
Identities = 164/237 (69%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTA 255097
|| ||||| |||||| | ||||||||||||||||||||||| ||| || | ||| |
Sbjct 205718 CGTCCAGGCGCGTTCGCGATCTACCTGGAGCCGTGGCACGCGGACGTTTACGAGTTCCTG 205659
Query 255098 CTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157
||| | || || || | |||||| || || ||||| | | | ||| |
Sbjct 205658 GACCTGAAGAAGAACACTGGAAAAGAGGAGGTGCGAGCTCGCGATTTGTTCTACGCACTG 205599
Query 255158 TGG-TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTG 255216
||| ||| ||| ||||| |||||||| || || ||| | | ||||||||||||||
Sbjct 205598 TGGGTGCC-CGACCTGTTCATGCGACGAGTCGAGGCTGACCAAATGTGGAGCCTCATGTG 205540
Query 255217 TCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTA 255273
||| || | |||||||| ||| ||||||||| || || || ||||| ||
Sbjct 205539 TCCGCACGACTGTCCCGGTCTCTCCGATGTTTGGGGTGAAGAATTCGAGAAACTCTA 205483
>seq738
Length=407637
Score = 84.2 bits (92), Expect = 7e-11
Identities = 125/176 (71%), Gaps = 1/176 (1%)
Strand=Plus/Minus
Query 443689 AAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTA 443748
||||| || |||| |||||| | || || ||||| ||||| ||||| | || ||
Sbjct 114765 AAAATTCAAGTTTCGCAGAGCGATTGGTAGCGTTTGCAGTGGTTGAAGGGATTTTCTTCT 114706
Query 443749 GCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACC 443808
|| || ||| || | || || ||||||||||||||| |||||| ||| | ||
Sbjct 114705 CTGGGAGTTTT-GCAGCAATATTTTGGTTGAAAAAGCGTAATATTATGCCAGGTTTAACT 114647
Query 443809 TTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
|| ||||| ||||| || ||| | || |||| || ||||| || || || |||||
Sbjct 114646 TTCAGTAATGAACTTATAAGTAGAGATGAGGCCTTACATTGTGAATTTGCATGTCT 114591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1587388518860310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |