Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_027987.1
Length=29508
Score E
Sequences producing significant alignments: (Bits) Value
seq13014 96.9 7e-16
>seq13014
Length=1707
Score = 96.9 bits (106), Expect = 7e-16
Identities = 232/351 (66%), Gaps = 0/351 (0%)
Strand=Plus/Plus
Query 1842 TATGACGTATTCGGTGGCGGTGGTGCAATTACTGCTGAACTAATGATTAACGGTATAGAT 1901
|| ||| | ||||| || || || |||||||| | ||| || | || || ||||
Sbjct 424 TACGACATCTTCGGAGGAGGCGGAGCAATTACATCCGAATGTATTTTAAATGGCTTAGAA 483
Query 1902 GTTGTTTATAATGACTTAGATAAAACAATTACTGACATGTTTAACCGTGTTTTAAGCCAA 1961
|| |||||| |||||||| || || || || ||| | || ||| | |||
Sbjct 484 GTATATTATAACGACTTAGACAAGGATATAACCAACGCTTTTGAACGAGTTATCTCTCAA 543
Query 1962 GATAGAGAATGGATCAAAACATTAATTGTTAGTCGTGATGAGTTCTTAAATATTAGAGAT 2021
|| | || ||||| |||| | |||||| ||| ||||| | |||| ||
Sbjct 544 GACCGTGAGTGGATTAAAAGCCTTATTGTTTCACGTACAGAGTTTACCGAGATTAAGGAG 603
Query 2022 AAAGAAAACAAAACAGTTGATGACGAATTGAAGTTGTTAGTCAATAGTTTTGGTAATAAT 2081
||||||||||| ||| |||||| ||||||||| | | || ||| ||||||||
Sbjct 604 AAAGAAAACAAGACAACAGATGACTTTTTGAAGTTGCTGATTAACTCTTTCGGTAATAAA 663
Query 2082 AGAATAGGATATTTATATAGTAATGAGATTAGCGATATAAAGTATAAGCTGGTTGTTGAA 2141
| | || ||||||||| ||| || ||| ||| |||| ||||| || | | |||
Sbjct 664 AAGAGAGATTATTTATATTCTAAAGAAATTTCAGATTTAAAATATAATCTAGCTAAAGAA 723
Query 2142 ATTATTGAAAACGAAGACACTTTTAAAAAATATAAGCAAACAGAAACTTAT 2192
|| |||||||| | ||| ||||| ||||| || || |||| |||
Sbjct 724 ATAATTGAAAAGCATGACGTTTTTAGTGGTTATAAACAGACCAAAACATAT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94251861558120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |