Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_027987.1 Length=29508 Score E Sequences producing significant alignments: (Bits) Value seq13014 96.9 7e-16 >seq13014 Length=1707 Score = 96.9 bits (106), Expect = 7e-16 Identities = 232/351 (66%), Gaps = 0/351 (0%) Strand=Plus/Plus Query 1842 TATGACGTATTCGGTGGCGGTGGTGCAATTACTGCTGAACTAATGATTAACGGTATAGAT 1901 || ||| | ||||| || || || |||||||| | ||| || | || || |||| Sbjct 424 TACGACATCTTCGGAGGAGGCGGAGCAATTACATCCGAATGTATTTTAAATGGCTTAGAA 483 Query 1902 GTTGTTTATAATGACTTAGATAAAACAATTACTGACATGTTTAACCGTGTTTTAAGCCAA 1961 || |||||| |||||||| || || || || ||| | || ||| | ||| Sbjct 484 GTATATTATAACGACTTAGACAAGGATATAACCAACGCTTTTGAACGAGTTATCTCTCAA 543 Query 1962 GATAGAGAATGGATCAAAACATTAATTGTTAGTCGTGATGAGTTCTTAAATATTAGAGAT 2021 || | || ||||| |||| | |||||| ||| ||||| | |||| || Sbjct 544 GACCGTGAGTGGATTAAAAGCCTTATTGTTTCACGTACAGAGTTTACCGAGATTAAGGAG 603 Query 2022 AAAGAAAACAAAACAGTTGATGACGAATTGAAGTTGTTAGTCAATAGTTTTGGTAATAAT 2081 ||||||||||| ||| |||||| ||||||||| | | || ||| |||||||| Sbjct 604 AAAGAAAACAAGACAACAGATGACTTTTTGAAGTTGCTGATTAACTCTTTCGGTAATAAA 663 Query 2082 AGAATAGGATATTTATATAGTAATGAGATTAGCGATATAAAGTATAAGCTGGTTGTTGAA 2141 | | || ||||||||| ||| || ||| ||| |||| ||||| || | | ||| Sbjct 664 AAGAGAGATTATTTATATTCTAAAGAAATTTCAGATTTAAAATATAATCTAGCTAAAGAA 723 Query 2142 ATTATTGAAAACGAAGACACTTTTAAAAAATATAAGCAAACAGAAACTTAT 2192 || |||||||| | ||| ||||| ||||| || || |||| ||| Sbjct 724 ATAATTGAAAAGCATGACGTTTTTAGTGGTTATAAACAGACCAAAACATAT 774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94251861558120