Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq412 82.4 1e-10 >seq412 Length=567167 Score = 82.4 bits (90), Expect = 1e-10 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||| || |||||||| ||||| |||| ||||| ||||||||||| ||||||| Sbjct 173412 CCTCATCGCGCGAAATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCT 173471 Query 122738 TCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 | | ||| | || | |||| || || ||||||||||| ||||| || || ||| Sbjct 173472 TAAGCCAGAATATGGACGCA-AAGCTGCCCGAGAAGAAGATGCCCTCAACGGCGGCGAAC 173530 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCAT--CAAACCATTTCATTGCCCATT 122854 || | || || ||| |||| | | | |||| | | | ||| | || ||||| | Sbjct 173531 GCCACAACTCGCTCGCCGAACGTGGCCG--TTTGGCTGGCGATCCACTGCAACGCCCAGT 173588 Query 122855 TCGCCTTCTTCTCAATACATGG 122876 ||||||| ||| || ||| || Sbjct 173589 CCGCCTTCCTCTTAACACACGG 173610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627666501076800