Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq1173 185 2e-42 >seq1173 Length=295699 Score = 185 bits (204), Expect = 2e-42 Identities = 567/864 (66%), Gaps = 21/864 (2%) Strand=Plus/Minus Query 17149 GTCCGGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAAC 17208 ||| ||||| || ||||| ||||||||||| ||||||| || || | || | || || Sbjct 75476 GTCTGGCGAAAATGACATTGCCCAGCCCACAGGTTTTCGAGCAAATAAATCCAATACCAC 75417 Query 17209 GGCGAGGTACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTG 17268 || || |||||||| || || ||||| |||||||| ||||| || ||||| |||| Sbjct 75416 CGCCAGATACGCCCATCGTGAGCCTGTCCAAATATAGGTTACATCGCCACACCAAACCTA 75357 Query 17269 ATTTGGCTCGGTCACGGCGAACTGCC-GTTCAAGGTAGTTAGGGA-TAGCAACATGTTCA 17326 | || |||| || | || || | ||| | | || | |||| || |||| | ||| Sbjct 75356 GTCAGGTCCGGTGACAGAAAATTGTCTGTTGA--GAAGATTGGGAATATCAACGCGCTCA 75299 Query 17327 TGACCACCACGTTTATACCGGTAAGTCGGCTGCTGACAGCTGACCAGCCCCAGCTCTTTC 17386 | | || ||||| || | | | || || || |||| | | ||||| | Sbjct 75298 TCTTCTCCCCGTTTGTATTGATGTTTTCGCGTTTGGCAACTGATAATGTTTAACTCTTCC 75239 Query 17387 ATGAGTCTGCCAGCAAGCCAGCGCCCCATCTGGTAGCC---TCTCTGGGTTGCCATTGTG 17443 || ||| | || || ||||| || || | | || | | | ||| | || ||| Sbjct 75238 ATTAGTTTACCGGCCAGCCAACGGCCAAGTTTTACACCGTATGTATTGGTAACTATCGTG 75179 Query 17444 GCGATGCTTCTTGCTCCGGCAGAGCCGTGGCTGATG--CCATGCAGTTCAAGTACCTGGC 17501 ||||| | || || || ||||| ||| |||| | ||| || ||| ||| ||| Sbjct 75178 GCGATACGCCTCGCGCCAGCAGACCCGCCACTGACGTTCCAAGC--TTCGCTGACCAGGC 75121 Query 17502 TGCGTAATACAGCCCGTCTGCCGTCTGGCTTTTCAGGACGGTTTTTCCAGTATTTGTAGC 17561 | ||| ||| | |||| | ||||| | || || ||| || || | Sbjct 75120 TACGTTTTACTGTCCGTTCAGCATCTGGTGCCTTGGGTCGACA---CCAATAGCGATAAC 75064 Query 17562 TGCTGCGATGGACCCCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTT 17621 |||| || || | | || | | || | | || |||||| ||||||| || | Sbjct 75063 TGCTTCGGTGAATATCAAAAATACCACACAACGCTTTTACCGGATAAAGCGCCCTTAGCT 75004 Query 17622 TCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAA 17681 | | | || | |||| | |||| ||||| ||||| |||||||| |||||||||||||| Sbjct 75003 TGTCAACTACCAAGAATTTTTCATTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAA 74944 Query 17682 TATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTG 17741 || ||||| |||||||| | ||||| | |||||| | | || | || ||||| || Sbjct 74943 GATGTCATTCTCCATTTCCAGGCGTTGAATTTTTTTCTTCA-TTCCCTGAACTCAATGTG 74885 Query 17742 TTCCGG-GGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTT 17800 ||||| | |||||| || | | |||||| || || || || ||| | | Sbjct 74884 CTCCGGCGTTAATGGCAGA-CCAGGGGCTGTTTTTCCTTGACGTTCTAAACGAAGGGCTC 74826 Query 17801 TCACCCATCGCGTCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGG 17860 | ||||||| | || | ||||||| |||| ||| || | ||||| || || Sbjct 74825 TTACCCATCTGCTAATAGCTGAAAGGCTTACATTCATCGCTTTCGCTGCCTCCAGGTGGG 74766 Query 17861 TGTAATTCTGGTCAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTC 17920 ||||||| ||||||| ||| | || |||| ||| | |||||| || || | | || Sbjct 74765 TGTAATTTTGGTCAAGGACTAATTTGGCGGTTTCACATTTAAATTCAGCAGTCA---TTT 74709 Query 17921 tttttttCATTATGGCACCTGT-GTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGGTG 17979 |||| ||||| ||||| | || |||||| ||||||||||||| | ||||| Sbjct 74708 TTTTACTCATTGGTCCACCTATAAAAATTATGAGGTAAGCATATCACCTCAACTTAGGTG 74649 Query 17980 GCCAAATTCAGTAAACCACTTCAA 18003 ||||||||||||| ||||| ||| Sbjct 74648 GCCAAATTCAGTATGCCACTACAA 74625 Score = 183 bits (202), Expect = 8e-42 Identities = 571/871 (66%), Gaps = 21/871 (2%) Strand=Plus/Minus Query 39774 GTCCGGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAAC 39833 ||| ||||| || ||||| ||||||||||| ||||||| || || | || | || || Sbjct 75476 GTCTGGCGAAAATGACATTGCCCAGCCCACAGGTTTTCGAGCAAATAAATCCAATACCAC 75417 Query 39834 GGCGAGGTACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTG 39893 || || |||||||| || || ||||| |||||||| ||||| || ||||| |||| Sbjct 75416 CGCCAGATACGCCCATCGTGAGCCTGTCCAAATATAGGTTACATCGCCACACCAAACCTA 75357 Query 39894 ATTTGGCTCGGTCACGGCGAACTGCC-GTTCAAGGTAGTTAGGGA-TAGCAACATGTTCA 39951 | || |||| || | || || | ||| | | || | |||| || |||| | ||| Sbjct 75356 GTCAGGTCCGGTGACAGAAAATTGTCTGTTGA--GAAGATTGGGAATATCAACGCGCTCA 75299 Query 39952 TGACCACCACGTTTATACCGGTAAGTCGGCTGCTGACAGCTGACCAGCCCCAGCTCTTTC 40011 | | || ||||| || | | | || || || |||| | | ||||| | Sbjct 75298 TCTTCTCCCCGTTTGTATTGATGTTTTCGCGTTTGGCAACTGATAATGTTTAACTCTTCC 75239 Query 40012 ATGAGTCTGCCAGCAAGCCAGCGCCCCATCTGGTAGCC---TCTCTGGGTTGCCATTGTG 40068 || ||| | || || ||||| || || | | || | | | ||| | || ||| Sbjct 75238 ATTAGTTTACCGGCCAGCCAACGGCCAAGTTTTACACCGTATGTATTGGTAACTATCGTG 75179 Query 40069 GCGATGCTTCTTGCTCCGGCAGAGCCGTGGCTGATG--CCATGCAGTTCAAGTACCTGGC 40126 ||||| | || || || ||||| ||| |||| | ||| || ||| ||| ||| Sbjct 75178 GCGATACGCCTCGCGCCAGCAGACCCGCCACTGACGTTCCAAGC--TTCGCTGACCAGGC 75121 Query 40127 TGCGTAATACAGCCCGTCTGCCGTCTGGCTTTTCAGGACGGTTTTTCCAGTATTTGTAGC 40186 | ||| ||| | |||| | ||||| | || || ||| || || | Sbjct 75120 TACGTTTTACTGTCCGTTCAGCATCTGGTGCCTTGGGTCGACA---CCAATAGCGATAAC 75064 Query 40187 TGCTGCGATGGACCCCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTT 40246 |||| || || | | || | | || | | || |||||| ||||||| || | Sbjct 75063 TGCTTCGGTGAATATCAAAAATACCACACAACGCTTTTACCGGATAAAGCGCCCTTAGCT 75004 Query 40247 TCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAA 40306 | | | || | |||| | |||| ||||| ||||| |||||||| |||||||||||||| Sbjct 75003 TGTCAACTACCAAGAATTTTTCATTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAA 74944 Query 40307 TATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTG 40366 || ||||| |||||||| | ||||| | |||||| | | || | || ||||| || Sbjct 74943 GATGTCATTCTCCATTTCCAGGCGTTGAATTTTTTTCTTCA-TTCCCTGAACTCAATGTG 74885 Query 40367 TTCCGG-GGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTT 40425 ||||| | |||||| || | | |||||| || || || || ||| | | Sbjct 74884 CTCCGGCGTTAATGGCAGA-CCAGGGGCTGTTTTTCCTTGACGTTCTAAACGAAGGGCTC 74826 Query 40426 TCACCCATCGCGTCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGG 40485 | ||||||| | || | ||||||| |||| ||| || | ||||| || || Sbjct 74825 TTACCCATCTGCTAATAGCTGAAAGGCTTACATTCATCGCTTTCGCTGCCTCCAGGTGGG 74766 Query 40486 TGTAATTCTGGTCAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTC 40545 ||||||| ||||||| ||| | || |||| ||| | |||||| || || | | || Sbjct 74765 TGTAATTTTGGTCAAGGACTAATTTGGCGGTTTCACATTTAAATTCAGCAGTCA---TTT 74709 Query 40546 tttttttCATTATGGCACCTGT-GTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGGTG 40604 |||| ||||| ||||| | || |||||| ||||||||||||| | ||||| Sbjct 74708 TTTTACTCATTGGTCCACCTATAAAAATTATGAGGTAAGCATATCACCTCAACTTAGGTG 74649 Query 40605 GCCAAATTCAGTAAACCACTTCACTCATCAT 40635 ||||||||||||| ||||| || ||||| Sbjct 74648 GCCAAATTCAGTATGCCACTACAAGTATCAT 74618 Score = 89.7 bits (98), Expect = 1e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 17633 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 17692 ||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| | Sbjct 38822 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 38881 Query 17693 CCATTTCAATACGTTGTAGCTTTT 17716 ||||||| | ||||| | |||| Sbjct 38882 CCATTTCCAGGCGTTGGGGTTTTT 38905 Score = 89.7 bits (98), Expect = 1e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 40258 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 40317 ||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| | Sbjct 38822 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 38881 Query 40318 CCATTTCAATACGTTGTAGCTTTT 40341 ||||||| | ||||| | |||| Sbjct 38882 CCATTTCCAGGCGTTGGGGTTTTT 38905 Score = 89.7 bits (98), Expect = 1e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 40258 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 40317 ||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| | Sbjct 46190 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 46131 Query 40318 CCATTTCAATACGTTGTAGCTTTT 40341 ||||||| | ||||| | |||| Sbjct 46130 CCATTTCCAGGCGTTGGGGTTTTT 46107 Score = 89.7 bits (98), Expect = 1e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 17633 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 17692 ||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| | Sbjct 46190 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 46131 Query 17693 CCATTTCAATACGTTGTAGCTTTT 17716 ||||||| | ||||| | |||| Sbjct 46130 CCATTTCCAGGCGTTGGGGTTTTT 46107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132086931874800