Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq1173 185 2e-42
>seq1173
Length=295699
Score = 185 bits (204), Expect = 2e-42
Identities = 567/864 (66%), Gaps = 21/864 (2%)
Strand=Plus/Minus
Query 17149 GTCCGGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAAC 17208
||| ||||| || ||||| ||||||||||| ||||||| || || | || | || ||
Sbjct 75476 GTCTGGCGAAAATGACATTGCCCAGCCCACAGGTTTTCGAGCAAATAAATCCAATACCAC 75417
Query 17209 GGCGAGGTACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTG 17268
|| || |||||||| || || ||||| |||||||| ||||| || ||||| ||||
Sbjct 75416 CGCCAGATACGCCCATCGTGAGCCTGTCCAAATATAGGTTACATCGCCACACCAAACCTA 75357
Query 17269 ATTTGGCTCGGTCACGGCGAACTGCC-GTTCAAGGTAGTTAGGGA-TAGCAACATGTTCA 17326
| || |||| || | || || | ||| | | || | |||| || |||| | |||
Sbjct 75356 GTCAGGTCCGGTGACAGAAAATTGTCTGTTGA--GAAGATTGGGAATATCAACGCGCTCA 75299
Query 17327 TGACCACCACGTTTATACCGGTAAGTCGGCTGCTGACAGCTGACCAGCCCCAGCTCTTTC 17386
| | || ||||| || | | | || || || |||| | | ||||| |
Sbjct 75298 TCTTCTCCCCGTTTGTATTGATGTTTTCGCGTTTGGCAACTGATAATGTTTAACTCTTCC 75239
Query 17387 ATGAGTCTGCCAGCAAGCCAGCGCCCCATCTGGTAGCC---TCTCTGGGTTGCCATTGTG 17443
|| ||| | || || ||||| || || | | || | | | ||| | || |||
Sbjct 75238 ATTAGTTTACCGGCCAGCCAACGGCCAAGTTTTACACCGTATGTATTGGTAACTATCGTG 75179
Query 17444 GCGATGCTTCTTGCTCCGGCAGAGCCGTGGCTGATG--CCATGCAGTTCAAGTACCTGGC 17501
||||| | || || || ||||| ||| |||| | ||| || ||| ||| |||
Sbjct 75178 GCGATACGCCTCGCGCCAGCAGACCCGCCACTGACGTTCCAAGC--TTCGCTGACCAGGC 75121
Query 17502 TGCGTAATACAGCCCGTCTGCCGTCTGGCTTTTCAGGACGGTTTTTCCAGTATTTGTAGC 17561
| ||| ||| | |||| | ||||| | || || ||| || || |
Sbjct 75120 TACGTTTTACTGTCCGTTCAGCATCTGGTGCCTTGGGTCGACA---CCAATAGCGATAAC 75064
Query 17562 TGCTGCGATGGACCCCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTT 17621
|||| || || | | || | | || | | || |||||| ||||||| || |
Sbjct 75063 TGCTTCGGTGAATATCAAAAATACCACACAACGCTTTTACCGGATAAAGCGCCCTTAGCT 75004
Query 17622 TCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAA 17681
| | | || | |||| | |||| ||||| ||||| |||||||| ||||||||||||||
Sbjct 75003 TGTCAACTACCAAGAATTTTTCATTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAA 74944
Query 17682 TATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTG 17741
|| ||||| |||||||| | ||||| | |||||| | | || | || ||||| ||
Sbjct 74943 GATGTCATTCTCCATTTCCAGGCGTTGAATTTTTTTCTTCA-TTCCCTGAACTCAATGTG 74885
Query 17742 TTCCGG-GGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTT 17800
||||| | |||||| || | | |||||| || || || || ||| | |
Sbjct 74884 CTCCGGCGTTAATGGCAGA-CCAGGGGCTGTTTTTCCTTGACGTTCTAAACGAAGGGCTC 74826
Query 17801 TCACCCATCGCGTCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGG 17860
| ||||||| | || | ||||||| |||| ||| || | ||||| || ||
Sbjct 74825 TTACCCATCTGCTAATAGCTGAAAGGCTTACATTCATCGCTTTCGCTGCCTCCAGGTGGG 74766
Query 17861 TGTAATTCTGGTCAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTC 17920
||||||| ||||||| ||| | || |||| ||| | |||||| || || | | ||
Sbjct 74765 TGTAATTTTGGTCAAGGACTAATTTGGCGGTTTCACATTTAAATTCAGCAGTCA---TTT 74709
Query 17921 tttttttCATTATGGCACCTGT-GTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGGTG 17979
|||| ||||| ||||| | || |||||| ||||||||||||| | |||||
Sbjct 74708 TTTTACTCATTGGTCCACCTATAAAAATTATGAGGTAAGCATATCACCTCAACTTAGGTG 74649
Query 17980 GCCAAATTCAGTAAACCACTTCAA 18003
||||||||||||| ||||| |||
Sbjct 74648 GCCAAATTCAGTATGCCACTACAA 74625
Score = 183 bits (202), Expect = 8e-42
Identities = 571/871 (66%), Gaps = 21/871 (2%)
Strand=Plus/Minus
Query 39774 GTCCGGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAAC 39833
||| ||||| || ||||| ||||||||||| ||||||| || || | || | || ||
Sbjct 75476 GTCTGGCGAAAATGACATTGCCCAGCCCACAGGTTTTCGAGCAAATAAATCCAATACCAC 75417
Query 39834 GGCGAGGTACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTG 39893
|| || |||||||| || || ||||| |||||||| ||||| || ||||| ||||
Sbjct 75416 CGCCAGATACGCCCATCGTGAGCCTGTCCAAATATAGGTTACATCGCCACACCAAACCTA 75357
Query 39894 ATTTGGCTCGGTCACGGCGAACTGCC-GTTCAAGGTAGTTAGGGA-TAGCAACATGTTCA 39951
| || |||| || | || || | ||| | | || | |||| || |||| | |||
Sbjct 75356 GTCAGGTCCGGTGACAGAAAATTGTCTGTTGA--GAAGATTGGGAATATCAACGCGCTCA 75299
Query 39952 TGACCACCACGTTTATACCGGTAAGTCGGCTGCTGACAGCTGACCAGCCCCAGCTCTTTC 40011
| | || ||||| || | | | || || || |||| | | ||||| |
Sbjct 75298 TCTTCTCCCCGTTTGTATTGATGTTTTCGCGTTTGGCAACTGATAATGTTTAACTCTTCC 75239
Query 40012 ATGAGTCTGCCAGCAAGCCAGCGCCCCATCTGGTAGCC---TCTCTGGGTTGCCATTGTG 40068
|| ||| | || || ||||| || || | | || | | | ||| | || |||
Sbjct 75238 ATTAGTTTACCGGCCAGCCAACGGCCAAGTTTTACACCGTATGTATTGGTAACTATCGTG 75179
Query 40069 GCGATGCTTCTTGCTCCGGCAGAGCCGTGGCTGATG--CCATGCAGTTCAAGTACCTGGC 40126
||||| | || || || ||||| ||| |||| | ||| || ||| ||| |||
Sbjct 75178 GCGATACGCCTCGCGCCAGCAGACCCGCCACTGACGTTCCAAGC--TTCGCTGACCAGGC 75121
Query 40127 TGCGTAATACAGCCCGTCTGCCGTCTGGCTTTTCAGGACGGTTTTTCCAGTATTTGTAGC 40186
| ||| ||| | |||| | ||||| | || || ||| || || |
Sbjct 75120 TACGTTTTACTGTCCGTTCAGCATCTGGTGCCTTGGGTCGACA---CCAATAGCGATAAC 75064
Query 40187 TGCTGCGATGGACCCCGAACACATGGCAGAGAGTGGCCACAGGATAACGCGCCCTGAGTT 40246
|||| || || | | || | | || | | || |||||| ||||||| || |
Sbjct 75063 TGCTTCGGTGAATATCAAAAATACCACACAACGCTTTTACCGGATAAAGCGCCCTTAGCT 75004
Query 40247 TCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAA 40306
| | | || | |||| | |||| ||||| ||||| |||||||| ||||||||||||||
Sbjct 75003 TGTCAACTACCAAGAATTTTTCATTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAA 74944
Query 40307 TATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTG 40366
|| ||||| |||||||| | ||||| | |||||| | | || | || ||||| ||
Sbjct 74943 GATGTCATTCTCCATTTCCAGGCGTTGAATTTTTTTCTTCA-TTCCCTGAACTCAATGTG 74885
Query 40367 TTCCGG-GGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCATCACGTAATTGTT 40425
||||| | |||||| || | | |||||| || || || || ||| | |
Sbjct 74884 CTCCGGCGTTAATGGCAGA-CCAGGGGCTGTTTTTCCTTGACGTTCTAAACGAAGGGCTC 74826
Query 40426 TCACCCATCGCGTCATTGTGGAAAGGCCGACATCCATAGCGCTGGCTGCATCTGCCACGG 40485
| ||||||| | || | ||||||| |||| ||| || | ||||| || ||
Sbjct 74825 TTACCCATCTGCTAATAGCTGAAAGGCTTACATTCATCGCTTTCGCTGCCTCCAGGTGGG 74766
Query 40486 TGTAATTCTGGTCAACGACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTGAAATTTC 40545
||||||| ||||||| ||| | || |||| ||| | |||||| || || | | ||
Sbjct 74765 TGTAATTTTGGTCAAGGACTAATTTGGCGGTTTCACATTTAAATTCAGCAGTCA---TTT 74709
Query 40546 tttttttCATTATGGCACCTGT-GTTGTTCTGAGGTGAGCATATCACCTCTGTTCAGGTG 40604
|||| ||||| ||||| | || |||||| ||||||||||||| | |||||
Sbjct 74708 TTTTACTCATTGGTCCACCTATAAAAATTATGAGGTAAGCATATCACCTCAACTTAGGTG 74649
Query 40605 GCCAAATTCAGTAAACCACTTCACTCATCAT 40635
||||||||||||| ||||| || |||||
Sbjct 74648 GCCAAATTCAGTATGCCACTACAAGTATCAT 74618
Score = 89.7 bits (98), Expect = 1e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 17633 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 17692
||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| |
Sbjct 38822 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 38881
Query 17693 CCATTTCAATACGTTGTAGCTTTT 17716
||||||| | ||||| | ||||
Sbjct 38882 CCATTTCCAGGCGTTGGGGTTTTT 38905
Score = 89.7 bits (98), Expect = 1e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 40258 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 40317
||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| |
Sbjct 38822 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 38881
Query 40318 CCATTTCAATACGTTGTAGCTTTT 40341
||||||| | ||||| | ||||
Sbjct 38882 CCATTTCCAGGCGTTGGGGTTTTT 38905
Score = 89.7 bits (98), Expect = 1e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 40258 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 40317
||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| |
Sbjct 46190 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 46131
Query 40318 CCATTTCAATACGTTGTAGCTTTT 40341
||||||| | ||||| | ||||
Sbjct 46130 CCATTTCCAGGCGTTGGGGTTTTT 46107
Score = 89.7 bits (98), Expect = 1e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 17633 GAGAACTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTTT 17692
||||||| ||||| ||||| ||||| |||||||| |||||||||||||| || ||||| |
Sbjct 46190 GAGAACTTTTCAGTGAGTCCGACATTAAGAGCGCAGTAGCCTTTTTTAAGATGTCATTCT 46131
Query 17693 CCATTTCAATACGTTGTAGCTTTT 17716
||||||| | ||||| | ||||
Sbjct 46130 CCATTTCCAGGCGTTGGGGTTTTT 46107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132086931874800
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