Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_028807.1 Length=43150 Score E Sequences producing significant alignments: (Bits) Value seq6496 183 8e-42 >seq6496 Length=10970 Score = 183 bits (202), Expect = 8e-42 Identities = 327/467 (70%), Gaps = 14/467 (3%) Strand=Plus/Minus Query 28285 ACGGGCATGGCGAAGGACGCGAAGGGCGCGTTCGATCTGCTGACCCGCGGCTACCAGTCG 28344 ||||| || |||||| || || ||| || |||||| | || || || | || Sbjct 10578 ACGGGGATCGCGAAGAACTCGCAGGAGGCCTTCGATATCCTCGCCGCCGCCGCCCGCAAC 10519 Query 28345 GGCGCCGACAAGGCCGGGGACCTCGCCGACACGGTCAATGAGTACG-GGACGCAGTTCCG 28403 |||| || ||||| ||| ||| |||||| ||| |||||| || || | |||| Sbjct 10518 GGCGTGAACCGGGCCGAGGATCTCCTCGACACATTCACGGAGTACCCGGTCGT-GCTCCG 10460 Query 28404 GAAGCTCGGGCTCGACGGGTCACAGGCCCTCGGCCTCGTCTCGCAGGCGATCAAGGCCGG 28463 |||||||| ||||||||| ||| ||||||||| || |||| | ||| ||| || Sbjct 10459 CAAGCTCGGTCTCGACGGGCAGCAGATGCTCGGCCTCCTCAACCAGGGGCTCACGGCAGG 10400 Query 28464 TGCACGCGACAGCGACGTCGCCGCCGACGCGCTGAAAGAGTTCTCGATCAGGGCGGTCGA 28523 || ||| |||||||||||| |||||||||||| || |||||| |||| | ||| ||| Sbjct 10399 GGCGCGCAACAGCGACGTCGTCGCCGACGCGCTCAAGGAGTTCCAGATCCGCGCGACCGA 10340 Query 28524 CG-GCAGCACGACGACCGCCGACGGGTTCAAGATGCTCGGGCTGTCGGCGTCCGACATGG 28582 || | ||| | | | ||| |||||||||||| |||| ||| ||| |||||| Sbjct 10339 CGCGTCGCA-GTCCAGCGCGGACGGGTTCAAGCGCATCGGCCTGAGCGCGCAGGACATGA 10281 Query 28583 CCGCGAAGATCGGCAAGGGCGGCACCTCGGCGTCGTCCGCG-----CTCGACCTCACCCT 28637 ||||||||||| ||| | |||| || || | ||||| ||| | | ||| Sbjct 10280 CCGCGAAGATC-GCA--GCCGGCGGGGAGG-GT-GCCCGCGAGGGTCTCCAGCAGGTCCT 10226 Query 28638 CGACAAGCTGCGCGGGATCGAGGACCCCGTGAAGCGCGGGCAGGCCGCGGTCGCACTGTT 28697 |||| ||| |||| | |||||||||||| ||||| |||||| || | ||||| Sbjct 10225 CGACGCGCTACGCGCCACAGAGGACCCCGTGCAGCGCAACGCGGCCGCCGTGGAGCTGTT 10166 Query 28698 CGGAACGCAGGCCGAAGACCTCGGCGACGCGTTGTTCTCGATGGACC 28744 ||||||| | ||||| || ||||| || ||| | ||| || | |||| Sbjct 10165 CGGAACGAAAGCCGAGGATCTCGGTGATGCGCTCTTCGCGCTCGACC 10119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137882126077152