Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_028807.1
Length=43150
Score E
Sequences producing significant alignments: (Bits) Value
seq6496 183 8e-42
>seq6496
Length=10970
Score = 183 bits (202), Expect = 8e-42
Identities = 327/467 (70%), Gaps = 14/467 (3%)
Strand=Plus/Minus
Query 28285 ACGGGCATGGCGAAGGACGCGAAGGGCGCGTTCGATCTGCTGACCCGCGGCTACCAGTCG 28344
||||| || |||||| || || ||| || |||||| | || || || | ||
Sbjct 10578 ACGGGGATCGCGAAGAACTCGCAGGAGGCCTTCGATATCCTCGCCGCCGCCGCCCGCAAC 10519
Query 28345 GGCGCCGACAAGGCCGGGGACCTCGCCGACACGGTCAATGAGTACG-GGACGCAGTTCCG 28403
|||| || ||||| ||| ||| |||||| ||| |||||| || || | ||||
Sbjct 10518 GGCGTGAACCGGGCCGAGGATCTCCTCGACACATTCACGGAGTACCCGGTCGT-GCTCCG 10460
Query 28404 GAAGCTCGGGCTCGACGGGTCACAGGCCCTCGGCCTCGTCTCGCAGGCGATCAAGGCCGG 28463
|||||||| ||||||||| ||| ||||||||| || |||| | ||| ||| ||
Sbjct 10459 CAAGCTCGGTCTCGACGGGCAGCAGATGCTCGGCCTCCTCAACCAGGGGCTCACGGCAGG 10400
Query 28464 TGCACGCGACAGCGACGTCGCCGCCGACGCGCTGAAAGAGTTCTCGATCAGGGCGGTCGA 28523
|| ||| |||||||||||| |||||||||||| || |||||| |||| | ||| |||
Sbjct 10399 GGCGCGCAACAGCGACGTCGTCGCCGACGCGCTCAAGGAGTTCCAGATCCGCGCGACCGA 10340
Query 28524 CG-GCAGCACGACGACCGCCGACGGGTTCAAGATGCTCGGGCTGTCGGCGTCCGACATGG 28582
|| | ||| | | | ||| |||||||||||| |||| ||| ||| ||||||
Sbjct 10339 CGCGTCGCA-GTCCAGCGCGGACGGGTTCAAGCGCATCGGCCTGAGCGCGCAGGACATGA 10281
Query 28583 CCGCGAAGATCGGCAAGGGCGGCACCTCGGCGTCGTCCGCG-----CTCGACCTCACCCT 28637
||||||||||| ||| | |||| || || | ||||| ||| | | |||
Sbjct 10280 CCGCGAAGATC-GCA--GCCGGCGGGGAGG-GT-GCCCGCGAGGGTCTCCAGCAGGTCCT 10226
Query 28638 CGACAAGCTGCGCGGGATCGAGGACCCCGTGAAGCGCGGGCAGGCCGCGGTCGCACTGTT 28697
|||| ||| |||| | |||||||||||| ||||| |||||| || | |||||
Sbjct 10225 CGACGCGCTACGCGCCACAGAGGACCCCGTGCAGCGCAACGCGGCCGCCGTGGAGCTGTT 10166
Query 28698 CGGAACGCAGGCCGAAGACCTCGGCGACGCGTTGTTCTCGATGGACC 28744
||||||| | ||||| || ||||| || ||| | ||| || | ||||
Sbjct 10165 CGGAACGAAAGCCGAGGATCTCGGTGATGCGCTCTTCGCGCTCGACC 10119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137882126077152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |