Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_028943.1
Length=29237
Score E
Sequences producing significant alignments: (Bits) Value
seq1173 111 3e-20
seq45868 84.2 4e-12
>seq1173
Length=295699
Score = 111 bits (122), Expect = 3e-20
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 22015 GAGGGGGATACACTGGTGGTCTGGAAGCTGGACAGGCTGGGGCGTAATATGCGGCATCTG 22074
||||| ||||| ||||| || ||||| || || | ||||| |||| | || ||
Sbjct 93601 GAGGGCGATACGCTGGTTGTATGGAAACTCGATCGTCTGGGTCGTAGCGTAAAACAGCTT 93542
Query 22075 GTCATTCTGGTTGAGGAACTGCGCGAACGCGGCGTTAATTTTCGCAGCCTGACGGATGCT 22134
|| | | | || || |||| | ||| ||| || | || || || |||||||||
Sbjct 93541 GTTGATATCGCTGGAGAGCTGCACAAACAGGGCATTCAGTTCAAAAGTCTCACGGATGCT 93482
Query 22135 ATTGATACCAGCACGCCGATGGGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAA 22194
||||||||| | || ||| ||||||||||||||| ||||| |||| | ||| || |||
Sbjct 93481 ATTGATACCGGAACACCGTCGGGGCGTTTTTTCTTCCATGTTATGGCTAGCCTTGCAGAA 93422
Query 22195 ATGGAACGAGAACTCATTGTCGAGCGGACTCGGGCCGGGCTGGA 22238
||||| ||||| | || |||| || || ||||| || || ||
Sbjct 93421 ATGGAGCGAGAGTTGATAATCGAACGTACGCGGGCAGGTCTTGA 93378
>seq45868
Length=467
Score = 84.2 bits (92), Expect = 4e-12
Identities = 119/166 (72%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 22109 TTAATTTTCGCAGCCTGACGGATGCTATTGATACCAGCACGCCGATGGGGCGTTTTTTCT 22168
|| |||||| || |||||||| |||| || || || | || ||||||||||
Sbjct 1 TTCATTTTCATAGTTTGACGGATTCTATCGACACTGCTTCGTCAGCAGGTCGTTTTTTCT 60
Query 22169 TTCATGTGATGGGTGCCCTGGCTGAAATGGA-ACGAGAACTCATTGTCGAGCGGACTCGG 22227
||||||||||| |||| |||| ||||||| ||||| || ||||| | || |||| |
Sbjct 61 TTCATGTGATGAGTGCGTTGGCGCAAATGGAGCCGAGAGCTGATTGTTAAACGTACTCAG 120
Query 22228 GCCGGGCTGGAAGCGGCCAGAGCCAAAGGTCGTATTGGTGGCAGAC 22273
|| || ||| || || ||| || ||| ||||| || || ||||
Sbjct 121 GCAGGTTTGGCCGCAGCGAGAAGCAGAGGACGTATCGGCGGTAGAC 166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 93385141012404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |