Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3617 107 2e-18 >seq3617 Length=57851 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 34671 TAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCG 34730 |||| || || |||||||| || || ||| | || |||||||||||||| ||||| || Sbjct 13915 TAGGTGTACCATTCAACATAGCCAGCTACTCGCTTCTCACGTACATGATAGCTCACGTGA 13974 Query 34731 TGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACC 34790 ||| ||| || || || | ||||| ||| | || || || | ||| |||| | Sbjct 13975 CGGGCCTGGAACCAGGTGAATTCGTGCACACGATAGGCGACTGTCACGTTTACTTGAATC 14034 Query 34791 ACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAA 34850 || |||| ||| | |||||||| || ||||| || | ||| || ||| | || | Sbjct 14035 ACGTCGACGCACTCAAAGTTCAGCTGCAGCGTGAGCCACGCCAGTTTCCACAGTTGAAGA 14094 Query 34851 TTATTCGAGCCGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGG 34904 ||| |||| |||||||| ||||| ||||| | ||| || |||| ||||| Sbjct 14095 TTAATCGAACCGTCACCGACATCGAGGACTTCAAATTCGACGATTTCGAGTTGG 14148 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 6441 CCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCTCGAATAATTTTGA 6500 ||||| |||| || ||| | ||||| ||||| |||||||| |||| |||| || | Sbjct 14148 CCAACTCGAAATCGTCGAATTTGAAGTCCTCGATGTCGGTGACGGTTCGATTAATCTTCA 14089 Query 6501 GCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCA 6560 ||| || ||| | || ||||| || |||||||| | ||| |||| ||| |||| Sbjct 14088 ACTGTGGAAACTGGCGTGGCTCACGCTGCAGCTGAACTTTGAGTGCGTCGACGTGATTCA 14029 Query 6561 GGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACAT 6620 ||| | || || || | ||| ||||| | || || || ||| ||| || | Sbjct 14028 AGTAAACGTGACAGTCGCCTATCGTGTGCACGAATTCACCTGGTTCCAGGCCCGTCACGT 13969 Query 6621 GAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTA 6674 |||| |||||||||||||| || | ||| || || |||||||| || || |||| Sbjct 13968 GAGCTATCATGTACGTGAGAAGCGAGTAGCTGGCTATGTTGAATGGTACACCTA 13915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448001522489760