Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3617 107 2e-18
>seq3617
Length=57851
Score = 107 bits (118), Expect = 2e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 34671 TAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCG 34730
|||| || || |||||||| || || ||| | || |||||||||||||| ||||| ||
Sbjct 13915 TAGGTGTACCATTCAACATAGCCAGCTACTCGCTTCTCACGTACATGATAGCTCACGTGA 13974
Query 34731 TGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACC 34790
||| ||| || || || | ||||| ||| | || || || | ||| |||| |
Sbjct 13975 CGGGCCTGGAACCAGGTGAATTCGTGCACACGATAGGCGACTGTCACGTTTACTTGAATC 14034
Query 34791 ACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAA 34850
|| |||| ||| | |||||||| || ||||| || | ||| || ||| | || |
Sbjct 14035 ACGTCGACGCACTCAAAGTTCAGCTGCAGCGTGAGCCACGCCAGTTTCCACAGTTGAAGA 14094
Query 34851 TTATTCGAGCCGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGG 34904
||| |||| |||||||| ||||| ||||| | ||| || |||| |||||
Sbjct 14095 TTAATCGAACCGTCACCGACATCGAGGACTTCAAATTCGACGATTTCGAGTTGG 14148
Score = 107 bits (118), Expect = 2e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 6441 CCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCTCGAATAATTTTGA 6500
||||| |||| || ||| | ||||| ||||| |||||||| |||| |||| || |
Sbjct 14148 CCAACTCGAAATCGTCGAATTTGAAGTCCTCGATGTCGGTGACGGTTCGATTAATCTTCA 14089
Query 6501 GCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCA 6560
||| || ||| | || ||||| || |||||||| | ||| |||| ||| ||||
Sbjct 14088 ACTGTGGAAACTGGCGTGGCTCACGCTGCAGCTGAACTTTGAGTGCGTCGACGTGATTCA 14029
Query 6561 GGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACAT 6620
||| | || || || | ||| ||||| | || || || ||| ||| || |
Sbjct 14028 AGTAAACGTGACAGTCGCCTATCGTGTGCACGAATTCACCTGGTTCCAGGCCCGTCACGT 13969
Query 6621 GAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTA 6674
|||| |||||||||||||| || | ||| || || |||||||| || || ||||
Sbjct 13968 GAGCTATCATGTACGTGAGAAGCGAGTAGCTGGCTATGTTGAATGGTACACCTA 13915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448001522489760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |