Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1095 82.4 7e-11 >seq1095 Length=312686 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || || | || |||| | || || Sbjct 84676 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCCTC 84617 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || ||||| || || | ||||||||||| || | | ||| ||||| Sbjct 84616 GAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTG 84557 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || || | || | | ||| || || |||||| |||| ||| || | || Sbjct 84556 GATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTT 84497 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || |||| |||||| |||||||| ||||| || Sbjct 84496 GCCGGTCAACGTTTTCACAAAGATCTGCATTTT 84464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429301864819454