Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq3617 114 1e-20
seq986 91.5 1e-13
>seq3617
Length=57851
Score = 114 bits (126), Expect = 1e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177
||||| | || |||||| || || | || ||||||| || ||| |||||| |||
Sbjct 14071 GGCTCACGCTGCAGCTGAACTTTGAGTGCGTCGACGTGATTCAAGTAAACGTGACAGTCG 14012
Query 27178 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 27237
|| | ||||| || || || || ||||| || || || |||||||| ||||||||||||
Sbjct 14011 CCTATCGTGTGCACGAATTCACCTGGTTCCAGGCCCGTCACGTGAGCTATCATGTACGTG 13952
Query 27238 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAG 27275
|| || ||||||||||| ||||| || ||||| || ||
Sbjct 13951 AGAAGCGAGTAGCTGGCTATGTTGAATGGTACACCTAG 13914
Score = 96.9 bits (106), Expect = 3e-15
Identities = 192/282 (68%), Gaps = 2/282 (1%)
Strand=Plus/Minus
Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330
|| || |||||||| ||||||||||||| | |||||| ||||| || ||
Sbjct 12126 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 12067
Query 27331 TAAAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389
|| ||||| || | | ||| || || || || ||||| | | ||| ||| |||
Sbjct 12066 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGTCGCTGGCGTT 12008
Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449
||| ||||||| ||||||||||||||| || || ||| | |||| | | | |||
Sbjct 12007 CCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGTC 11948
Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509
||||||| || || ||| | | ||||| ||||||| ||||||| |||||
Sbjct 11947 ACGCAGCTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTCC 11888
Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
|| || | ||| || || ||||| || || || ||||| ||
Sbjct 11887 AAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 11846
>seq986
Length=341358
Score = 91.5 bits (100), Expect = 1e-13
Identities = 191/282 (68%), Gaps = 2/282 (1%)
Strand=Plus/Minus
Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330
|| || |||||||| ||||||||||||| | |||||| ||||| || ||
Sbjct 236062 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 236003
Query 27331 TAAAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389
|| ||||| || | | ||| || || || || ||||| | | ||| ||| |||
Sbjct 236002 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGTCGCTGGCGTT 235944
Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449
||| ||||||| ||||||||||||||| || || ||| | |||| | | | |||
Sbjct 235943 CCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGTC 235884
Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509
||| ||| || || ||| | | ||||| ||||||| ||||||| |||||
Sbjct 235883 ACGCAACTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTCC 235824
Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551
|| || | ||| || || ||||| || || || ||||| ||
Sbjct 235823 AAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 235782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369297532146098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |