Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3617 114 1e-20 seq986 91.5 1e-13 >seq3617 Length=57851 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||| | || |||||| || || | || ||||||| || ||| |||||| ||| Sbjct 14071 GGCTCACGCTGCAGCTGAACTTTGAGTGCGTCGACGTGATTCAAGTAAACGTGACAGTCG 14012 Query 27178 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 27237 || | ||||| || || || || ||||| || || || |||||||| |||||||||||| Sbjct 14011 CCTATCGTGTGCACGAATTCACCTGGTTCCAGGCCCGTCACGTGAGCTATCATGTACGTG 13952 Query 27238 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAG 27275 || || ||||||||||| ||||| || ||||| || || Sbjct 13951 AGAAGCGAGTAGCTGGCTATGTTGAATGGTACACCTAG 13914 Score = 96.9 bits (106), Expect = 3e-15 Identities = 192/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330 || || |||||||| ||||||||||||| | |||||| ||||| || || Sbjct 12126 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 12067 Query 27331 TAAAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389 || ||||| || | | ||| || || || || ||||| | | ||| ||| ||| Sbjct 12066 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGTCGCTGGCGTT 12008 Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449 ||| ||||||| ||||||||||||||| || || ||| | |||| | | | ||| Sbjct 12007 CCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGTC 11948 Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509 ||||||| || || ||| | | ||||| ||||||| ||||||| ||||| Sbjct 11947 ACGCAGCTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTCC 11888 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 || || | ||| || || ||||| || || || ||||| || Sbjct 11887 AAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 11846 >seq986 Length=341358 Score = 91.5 bits (100), Expect = 1e-13 Identities = 191/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330 || || |||||||| ||||||||||||| | |||||| ||||| || || Sbjct 236062 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 236003 Query 27331 TAAAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389 || ||||| || | | ||| || || || || ||||| | | ||| ||| ||| Sbjct 236002 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGTCGCTGGCGTT 235944 Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449 ||| ||||||| ||||||||||||||| || || ||| | |||| | | | ||| Sbjct 235943 CCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGTC 235884 Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509 ||| ||| || || ||| | | ||||| ||||||| ||||||| ||||| Sbjct 235883 ACGCAACTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTCC 235824 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 || || | ||| || || ||||| || || || ||||| || Sbjct 235823 AAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 235782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369297532146098