Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_031028.1
Length=45285
Score E
Sequences producing significant alignments: (Bits) Value
seq6496 113 1e-20
>seq6496
Length=10970
Score = 113 bits (124), Expect = 1e-20
Identities = 298/448 (67%), Gaps = 8/448 (2%)
Strand=Plus/Minus
Query 10310 ACTCGAACGAGGCCTTCGACCTGCTGACTCGTGGTTTCCAGCAGGGG-GTGGACAAGGGC 10368
||||| | ||||||||||| | || | || | || ||| || ||| || || |
Sbjct 10562 ACTCGCAGGAGGCCTTCGATATCCTCGC-CGCCGCCGCCCGCAACGGCGTGAACCGGGCC 10504
Query 10369 GAGGACTTCCTGGACACCCTGACCGAGTACCCGACGCTGTTCA--AGGCCTTGGGCCTGT 10426
||||| |||| ||||| | || ||||||||| || || | || | || ||
Sbjct 10503 GAGGATCTCCTCGACACATTCACGGAGTACCCGGTCGTGCTCCGCAAGC--TCGGTCTCG 10446
Query 10427 CCGGCCAGGAAGCGACCGGCCTGCTCTCGCAAGGTCTGGCCGCTGGTGCGCGCAACTCCG 10486
||| ||| | | |||||| ||| || || || | || || ||||||||| ||
Sbjct 10445 ACGGGCAGCAGATGCTCGGCCTCCTCAACCAGGGGCTCACGGCAGGGGCGCGCAACAGCG 10386
Query 10487 ACGTGGTGGCGGACGCACTCAAGGAGTTTCAGATCCGGGCTACTGACGGGTCCAAGGCGA 10546
|||| || || ||||| ||||||||||| |||||||| || || |||| ||| || | |
Sbjct 10385 ACGTCGTCGCCGACGCGCTCAAGGAGTTCCAGATCCGCGCGACCGACGCGTCGCAGTCCA 10326
Query 10547 GTGCTGCCGCGTTCGAAGCTC-TGGGGTTCAACGCAGCCCAGATGACCGCCCAGATCGCC 10605
| || | || |||| |||| | | || | | ||| | |||||||| |||||||
Sbjct 10325 GCGCGGACGGGTTC-AAGCGCATCGGCCTGAGCGCGCAGGACATGACCGCGAAGATCGCA 10267
Query 10606 GGGGGCGGCGAAGGTGCGAAGAACGGTTTGGACGCGGTCCTGGACCGCCTGCGTGCAGTC 10665
| ||||| || ||||| | ||| | | |||||| ||| || || ||
Sbjct 10266 GCCGGCGGGGAGGGTGCCCGCGAGGGTCTCCAGCAGGTCCTCGACGCGCTACGCGCCACA 10207
Query 10666 GAGGACCCGGTTTTGCGCAGCCAGGCCGCAGTCGGTTTGTTCGGTACCAAGGCCGAGGAC 10725
|||||||| || ||||| | |||||| || | ||||||| || || ||||||||
Sbjct 10206 GAGGACCCCGTGCAGCGCAACGCGGCCGCCGTGGAGCTGTTCGGAACGAAAGCCGAGGAT 10147
Query 10726 CTGGCCGCTTCGCTGCTGGCCCTGGACC 10753
|| | | | |||| | || || ||||
Sbjct 10146 CTCGGTGATGCGCTCTTCGCGCTCGACC 10119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144710348826612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |