Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq738 289 4e-73
seq2120 149 9e-31
>seq738
Length=407637
Score = 289 bits (320), Expect = 4e-73
Identities = 1161/1796 (65%), Gaps = 109/1796 (6%)
Strand=Plus/Plus
Query 76905 ATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATG 76964
||||||| ||||| |||||| || || | | |||||||| ||||| | | ||
Sbjct 382938 ATATTCAATGACTGCGATTGATCAATAAACGGTGCTCTATCAATAGCCATATCAACAAGT 382997
Query 76965 GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGT-- 77022
||||| |||| ||| ||||| | ||| | || || || | || | ||||||
Sbjct 382998 GTCTTCTGAGAAATCTCCCATACTGTTCTATAACATTTCTTCAGATAA----GAAGGTAT 383053
Query 77023 -----TTGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTT-ATATCATCAT 77076
|| |||||||||| || ||| | |||||| | || | | || | |||||
Sbjct 383054 CGATTTTATATTTTGAATTGATCCATTGTTCCTCATAATT-TCTTGTCTCATTTTATCAT 383112
Query 77077 TCCACAATTTCCTCTCTG--TTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134
|||| | || ||| | ||| || | | | || ||| | || ||||| |
Sbjct 383113 TCCAAAGC--CCAGCCTGAATCAAATCTTTCATTAAATATTTATTTATAATCTGAAACTG 383170
Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194
||||| || || | || |||||||| || |||||| | ||||||| ||
Sbjct 383171 ACCAGATAAAACCTGTCTTGTATAAATATTTGAAGTTATTGGTTCAATTGATTCATAATT 383230
Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254
|| |||||||| | ||| || || || ||||| |||| | |||| | |||| |
Sbjct 383231 GCCTAAAATTTGTGAAGTGGATGCGGTAGGCATTTGTGCAATTAATAGAGAGTTTCGAAT 383290
Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAAC 77314
|||| | | ||||| | | ||| |||| | |||||| || | || |||
Sbjct 383291 TCCATATTTACTGATATCTTTTTTCAGATTATCCCAATCAAGAAACTGGGAGGGTTGTTT 383350
Query 77315 ATCCCAAAGATCGTATTGTAGAATTCCGTTACT-AGCATATGATCCATTATATGTTTCAT 77373
|| ||| ||||| || || | || || || || || | | ||| |||| | ||
Sbjct 383351 ATTCCATAGATCATACTGCAAAAAGCCCTTGCTGAGTGGACTA-CCAATATAACTGGGAT 383409
Query 77374 AAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTT 77433
| |||| || || ||| |||||||| || ||||| | | | | ||||| | ||||
Sbjct 383410 ATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCATAATAGAGAGTTT 383469
Query 77434 CGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAA 77493
| || || |||||||| | | | ||| ||| || | || | ||||| |
Sbjct 383470 CAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAAATCA 383529
Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553
| || ||| ||||| ||||||| ||| || ||||||||||||| | | ||||| ||||
Sbjct 383530 TGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTTGAAA 383589
Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT---TCTAA 77610
|| | |||| || | ||||||||| || || || | |||||| ||||| | |||
Sbjct 383590 ATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGTGTAA 383649
Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAAT---CTTCCATCTATAAC-- 77665
||||| | ||||| ||| | | |||| |||||||||| | ||| |||
Sbjct 383650 CAACTTTTGTAACC-TGTC--TCAATTTATAAAAATCAAATACATTATCATTGGGAACTA 383706
Query 77666 -AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-TAGCGTTGGCA 77723
||| | || | ||||| || || |||||||| ||||| | |||| | | | | |
Sbjct 383707 TAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT-GAA 383765
Query 77724 TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783
|||||| || || ||||||| ||||| ||||| || || |||| ||| ||||||
Sbjct 383766 AATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGTTA 383825
Query 77784 CTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGAT 77843
|||| |||| |||||| | | ||| | || || |||||||| ||
Sbjct 383826 GACTTTCTATTAATACTATCCTTAAATAACATATAGGGTAATCCAGTTTCAATTTGACTA 383885
Query 77844 TCGATAATAGATTTCCAG-ACGACTCTAGCTTTTATCATAGATTTG-------TATCGCC 77895
|| || || |||| | || | ||| ||| ||| ||||| |||| |
Sbjct 383886 TCAATTAT---TTTCATGAACAATTCT--CTT---GCATCTATTTGTTCCAAATATCTCT 383937
Query 77896 TCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC--ATCCAA 77953
| ||| ||||||||| |||||| |||||| |||| |||||||| || || |
Sbjct 383938 TTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAACGTCTGATAGAT 383997
Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCA---GTCACCATCTTCCTTAACTCGTTT 78010
| || |||| |||||| ||||| || ||| ||| || |||| || |
Sbjct 383998 T--TGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCC---ACCCTAGA 384052
Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070
|||||| ||||||| | ||| ||| || |||| ||||| | |||| |||| |||||
Sbjct 384053 CATAAATAGATCAGACAACCAAAGACCATAGAATAAATCTCTTGCTCTAAGTTCATCATT 384112
Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130
|| |||| ||||| | || | ||| | || ||||||| |||||||| |||| |||
Sbjct 384113 GCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATA 384172
Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190
||||| || | || ||||| || ||||||||||| | |||| | | | ||||
Sbjct 384173 GATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATT 384229
Query 78191 --ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTG---TTCCAG---AA 78242
|||||| |||| | || ||||| ||||||| |||| ||
Sbjct 384230 AAATAAAC-----GAATTGTAGAAA-----TTAGA----CCATTTGAAACCCCAGGATAA 384275
Query 78243 A---TATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299
| ||| | | | |||| ||| | | | || || ||||| || |||
Sbjct 384276 ATTTTATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATA 384335
Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCA---TCC 78356
|||||||||| ||| ||| ||| | |||||| || ||| || || ||| |||
Sbjct 384336 TTAGATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCC 384395
Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416
| | ||||| || |||||| || | || ||| || || ||| | |||||| | || |
Sbjct 384396 A--AAGTTAATAA-AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGT 384452
Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476
|| |||| |||||| || | |||||| || || |||| || ||||| || ||
Sbjct 384453 GTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTC----TCTTAT 384508
Query 78477 TCTATGTC-CCATTG-----ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGT 78530
| |||| |||| || || | ||||| ||| | ||| |||||||| ||||||
Sbjct 384509 --TTTGTCAATATTGTTACCATTTATACTTACCGATACTCTCATAAACATATGTTGAGGT 384566
Query 78531 CTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 78590
||||||| | ||||| ||||||| | ||||||| |||| || |||||| | |||
Sbjct 384567 CTTTCAATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCA 384626
Query 78591 AAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACA--GAATTTAGTTTATCT 78644
||||| | || | | ||||| || ||| | ||||| ||||||| || ||||
Sbjct 384627 AAATATGTAAATTCATAATCTCTATCATAATT--TAACATGGAATTTATTTGATCT 384680
Score = 286 bits (316), Expect = 5e-72
Identities = 590/874 (68%), Gaps = 8/874 (1%)
Strand=Plus/Plus
Query 47849 TTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 47908
|||||||||||||| ||| | || || || ||||| || || |||||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 47909 TTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAAT 47968
||||| ||||| || |||||| |||| ||||| ||| | |||| | ||| |
Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418
Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028
| |||||| ||||| ||| |||||| | |||| | ||||||| |||| ||
Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478
Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088
|| ||| |||| | ||| || ||||| ||| ||| ||| || || ||| ||||||
Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538
Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTT---AAACATTAAACATGC 48145
|| ||| || ||| | | || |||| ||| | | | | ||||||
Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598
Query 48146 AAAATCACAATG-AAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204
||| |||||||| ||| ||| |||||||||| || | ||| ||| || || | ||| |
Sbjct 114599 AAATTCACAATGTAAGGCCT-CATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTG 114657
Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264
|||| | ||| ||||| | |||||||||||| || ||| ||||| ||||| || |
Sbjct 114658 GCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCC 114717
Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGTATCC 48321
|||| || | ||||| || | || |||| || |||| | || | | |||
Sbjct 114718 CTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATAT 114777
Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381
| | |||||| |||| || ||| |||| || || ||||| || ||||| |
Sbjct 114778 ATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAA 114837
Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441
|| || || | || || || | | |||| |||| ||| | |||||||| || |
Sbjct 114838 GATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCTCTG 114897
Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501
| || |||||||| || | | ||||| | ||| ||| |||| ||||| |||| ||||
Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957
Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561
| || | |||| |||| |||||| ||| || ||| ||| | ||||||||
Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCAAAAA 115017
Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621
|||| | | |||| ||||||| |||||| | || ||||| || ||||| | | | |
Sbjct 115018 ATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGTAA 115077
Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681
|||| || |||| ||| || ||||| | |||||||| ||||| | | || |||||||
Sbjct 115078 TATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATACT 115137
Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAAT 48715
| | ||||||||| |||| ||||| || ||
Sbjct 115138 TGTACCATATATCGGGGTATAATATTGGAAATAT 115171
Score = 84.2 bits (92), Expect = 3e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 95789 GTATAGATGAGGGACAATTCTTTCCTGACATAGTAGAATTTTGTGAACTCATGGCAAACA 95848
||||||||||||||||||| || ||| | ||||||||||||||| | ||| | |
Sbjct 154916 GTATAGATGAGGGACAATTTTTCGTTGATGTGGTAGAATTTTGTGAAATGATGATAGGTA 154975
Query 95849 ATGGAAAAATAGTTATAGTGGCAGCATTAGATGGAACATTTCAACGCAAGCCGTTTACGA 95908
|||| ||||| ||||||| || | | |||| || || | | || || ||| |
Sbjct 154976 ATGGGAAAATTATTATAGTCGCTGGTCTTGATGCAAAATATAATATGAAACCTTTTGAAA 155035
Query 95909 CTATTTCGAATCTTATTCCGTTATCTGAAATGGTAGTAAAACTGACAGCAGTATGTATGA 95968
|||| ||||||||||| |||| |||| ||| | ||| | | ||| | ||| |
Sbjct 155036 ATATTATCAATCTTATTCCAATATCCGAAAAGGTTGATAAATTATCTGCAATTTGTTACA 155095
Query 95969 AGTGTTTTAAAGAGGCATCGTTTTCTAAA 95997
||| |||||| |||| ||| | |||
Sbjct 155096 TTTGTAATAAAGATGCATATTTTACAAAA 155124
>seq2120
Length=154726
Score = 149 bits (164), Expect = 9e-31
Identities = 246/354 (69%), Gaps = 2/354 (1%)
Strand=Plus/Minus
Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATT 48422
|| ||||| || ||||| ||| || || | || || || | | |||| |||| |
Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062
Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482
|| | |||||||| || || || |||||||| || | | ||||| | ||| ||| ||
Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002
Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542
|| ||||| |||| ||||| || | |||| |||| |||||| ||| || |||
Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942
Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTC 48602
||| | |||||||||||| | | |||| ||||||| |||||| | || |||
Sbjct 145941 GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTC 145882
Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662
|| || ||||| | | | ||||| || |||| ||| || ||||| | ||||| || |||
Sbjct 145881 AGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGAT 145822
Query 48663 GCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATA 48716
|| | | || ||||||| | | ||||||||| |||| ||| |||||||
Sbjct 145821 GCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATT--GAAAATA 145770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694264520125120
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