Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq738 289 4e-73 seq2120 149 9e-31 >seq738 Length=407637 Score = 289 bits (320), Expect = 4e-73 Identities = 1161/1796 (65%), Gaps = 109/1796 (6%) Strand=Plus/Plus Query 76905 ATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATG 76964 ||||||| ||||| |||||| || || | | |||||||| ||||| | | || Sbjct 382938 ATATTCAATGACTGCGATTGATCAATAAACGGTGCTCTATCAATAGCCATATCAACAAGT 382997 Query 76965 GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGT-- 77022 ||||| |||| ||| ||||| | ||| | || || || | || | |||||| Sbjct 382998 GTCTTCTGAGAAATCTCCCATACTGTTCTATAACATTTCTTCAGATAA----GAAGGTAT 383053 Query 77023 -----TTGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTT-ATATCATCAT 77076 || |||||||||| || ||| | |||||| | || | | || | ||||| Sbjct 383054 CGATTTTATATTTTGAATTGATCCATTGTTCCTCATAATT-TCTTGTCTCATTTTATCAT 383112 Query 77077 TCCACAATTTCCTCTCTG--TTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134 |||| | || ||| | ||| || | | | || ||| | || ||||| | Sbjct 383113 TCCAAAGC--CCAGCCTGAATCAAATCTTTCATTAAATATTTATTTATAATCTGAAACTG 383170 Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194 ||||| || || | || |||||||| || |||||| | ||||||| || Sbjct 383171 ACCAGATAAAACCTGTCTTGTATAAATATTTGAAGTTATTGGTTCAATTGATTCATAATT 383230 Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254 || |||||||| | ||| || || || ||||| |||| | |||| | |||| | Sbjct 383231 GCCTAAAATTTGTGAAGTGGATGCGGTAGGCATTTGTGCAATTAATAGAGAGTTTCGAAT 383290 Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAAC 77314 |||| | | ||||| | | ||| |||| | |||||| || | || ||| Sbjct 383291 TCCATATTTACTGATATCTTTTTTCAGATTATCCCAATCAAGAAACTGGGAGGGTTGTTT 383350 Query 77315 ATCCCAAAGATCGTATTGTAGAATTCCGTTACT-AGCATATGATCCATTATATGTTTCAT 77373 || ||| ||||| || || | || || || || || | | ||| |||| | || Sbjct 383351 ATTCCATAGATCATACTGCAAAAAGCCCTTGCTGAGTGGACTA-CCAATATAACTGGGAT 383409 Query 77374 AAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTT 77433 | |||| || || ||| |||||||| || ||||| | | | | ||||| | |||| Sbjct 383410 ATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCATAATAGAGAGTTT 383469 Query 77434 CGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAA 77493 | || || |||||||| | | | ||| ||| || | || | ||||| | Sbjct 383470 CAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAAATCA 383529 Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553 | || ||| ||||| ||||||| ||| || ||||||||||||| | | ||||| |||| Sbjct 383530 TGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTTGAAA 383589 Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT---TCTAA 77610 || | |||| || | ||||||||| || || || | |||||| ||||| | ||| Sbjct 383590 ATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGTGTAA 383649 Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAAT---CTTCCATCTATAAC-- 77665 ||||| | ||||| ||| | | |||| |||||||||| | ||| ||| Sbjct 383650 CAACTTTTGTAACC-TGTC--TCAATTTATAAAAATCAAATACATTATCATTGGGAACTA 383706 Query 77666 -AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-TAGCGTTGGCA 77723 ||| | || | ||||| || || |||||||| ||||| | |||| | | | | | Sbjct 383707 TAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT-GAA 383765 Query 77724 TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTG 77783 |||||| || || ||||||| ||||| ||||| || || |||| ||| |||||| Sbjct 383766 AATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGTTA 383825 Query 77784 CTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGAT 77843 |||| |||| |||||| | | ||| | || || |||||||| || Sbjct 383826 GACTTTCTATTAATACTATCCTTAAATAACATATAGGGTAATCCAGTTTCAATTTGACTA 383885 Query 77844 TCGATAATAGATTTCCAG-ACGACTCTAGCTTTTATCATAGATTTG-------TATCGCC 77895 || || || |||| | || | ||| ||| ||| ||||| |||| | Sbjct 383886 TCAATTAT---TTTCATGAACAATTCT--CTT---GCATCTATTTGTTCCAAATATCTCT 383937 Query 77896 TCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATC--ATCCAA 77953 | ||| ||||||||| |||||| |||||| |||| |||||||| || || | Sbjct 383938 TTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAACGTCTGATAGAT 383997 Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCA---GTCACCATCTTCCTTAACTCGTTT 78010 | || |||| |||||| ||||| || ||| ||| || |||| || | Sbjct 383998 T--TGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCC---ACCCTAGA 384052 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 |||||| ||||||| | ||| ||| || |||| ||||| | |||| |||| ||||| Sbjct 384053 CATAAATAGATCAGACAACCAAAGACCATAGAATAAATCTCTTGCTCTAAGTTCATCATT 384112 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||| ||||| | || | ||| | || ||||||| |||||||| |||| ||| Sbjct 384113 GCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATA 384172 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 ||||| || | || ||||| || ||||||||||| | |||| | | | |||| Sbjct 384173 GATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATT 384229 Query 78191 --ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTG---TTCCAG---AA 78242 |||||| |||| | || ||||| ||||||| |||| || Sbjct 384230 AAATAAAC-----GAATTGTAGAAA-----TTAGA----CCATTTGAAACCCCAGGATAA 384275 Query 78243 A---TATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299 | ||| | | | |||| ||| | | | || || ||||| || ||| Sbjct 384276 ATTTTATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATA 384335 Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCA---TCC 78356 |||||||||| ||| ||| ||| | |||||| || ||| || || ||| ||| Sbjct 384336 TTAGATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCC 384395 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 | | ||||| || |||||| || | || ||| || || ||| | |||||| | || | Sbjct 384396 A--AAGTTAATAA-AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGT 384452 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || |||| |||||| || | |||||| || || |||| || ||||| || || Sbjct 384453 GTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTC----TCTTAT 384508 Query 78477 TCTATGTC-CCATTG-----ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGT 78530 | |||| |||| || || | ||||| ||| | ||| |||||||| |||||| Sbjct 384509 --TTTGTCAATATTGTTACCATTTATACTTACCGATACTCTCATAAACATATGTTGAGGT 384566 Query 78531 CTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 78590 ||||||| | ||||| ||||||| | ||||||| |||| || |||||| | ||| Sbjct 384567 CTTTCAATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCA 384626 Query 78591 AAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACA--GAATTTAGTTTATCT 78644 ||||| | || | | ||||| || ||| | ||||| ||||||| || |||| Sbjct 384627 AAATATGTAAATTCATAATCTCTATCATAATT--TAACATGGAATTTATTTGATCT 384680 Score = 286 bits (316), Expect = 5e-72 Identities = 590/874 (68%), Gaps = 8/874 (1%) Strand=Plus/Plus Query 47849 TTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 47908 |||||||||||||| ||| | || || || ||||| || || |||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 47909 TTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAAT 47968 ||||| ||||| || |||||| |||| ||||| ||| | |||| | ||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418 Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028 | |||||| ||||| ||| |||||| | |||| | ||||||| |||| || Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 || ||| |||| | ||| || ||||| ||| ||| ||| || || ||| |||||| Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTT---AAACATTAAACATGC 48145 || ||| || ||| | | || |||| ||| | | | | |||||| Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598 Query 48146 AAAATCACAATG-AAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 ||| |||||||| ||| ||| |||||||||| || | ||| ||| || || | ||| | Sbjct 114599 AAATTCACAATGTAAGGCCT-CATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTG 114657 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| | ||| ||||| | |||||||||||| || ||| ||||| ||||| || | Sbjct 114658 GCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCC 114717 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---TTCGTTGTGTATCC 48321 |||| || | ||||| || | || |||| || |||| | || | | ||| Sbjct 114718 CTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATAT 114777 Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381 | | |||||| |||| || ||| |||| || || ||||| || ||||| | Sbjct 114778 ATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAA 114837 Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 || || || | || || || | | |||| |||| ||| | |||||||| || | Sbjct 114838 GATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCTCTG 114897 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 | || |||||||| || | | ||||| | ||| ||| |||| ||||| |||| |||| Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | |||| |||| |||||| ||| || ||| ||| | |||||||| Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCAAAAA 115017 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621 |||| | | |||| ||||||| |||||| | || ||||| || ||||| | | | | Sbjct 115018 ATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGTAA 115077 Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 |||| || |||| ||| || ||||| | |||||||| ||||| | | || ||||||| Sbjct 115078 TATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATACT 115137 Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAAT 48715 | | ||||||||| |||| ||||| || || Sbjct 115138 TGTACCATATATCGGGGTATAATATTGGAAATAT 115171 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 95789 GTATAGATGAGGGACAATTCTTTCCTGACATAGTAGAATTTTGTGAACTCATGGCAAACA 95848 ||||||||||||||||||| || ||| | ||||||||||||||| | ||| | | Sbjct 154916 GTATAGATGAGGGACAATTTTTCGTTGATGTGGTAGAATTTTGTGAAATGATGATAGGTA 154975 Query 95849 ATGGAAAAATAGTTATAGTGGCAGCATTAGATGGAACATTTCAACGCAAGCCGTTTACGA 95908 |||| ||||| ||||||| || | | |||| || || | | || || ||| | Sbjct 154976 ATGGGAAAATTATTATAGTCGCTGGTCTTGATGCAAAATATAATATGAAACCTTTTGAAA 155035 Query 95909 CTATTTCGAATCTTATTCCGTTATCTGAAATGGTAGTAAAACTGACAGCAGTATGTATGA 95968 |||| ||||||||||| |||| |||| ||| | ||| | | ||| | ||| | Sbjct 155036 ATATTATCAATCTTATTCCAATATCCGAAAAGGTTGATAAATTATCTGCAATTTGTTACA 155095 Query 95969 AGTGTTTTAAAGAGGCATCGTTTTCTAAA 95997 ||| |||||| |||| ||| | ||| Sbjct 155096 TTTGTAATAAAGATGCATATTTTACAAAA 155124 >seq2120 Length=154726 Score = 149 bits (164), Expect = 9e-31 Identities = 246/354 (69%), Gaps = 2/354 (1%) Strand=Plus/Minus Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATT 48422 || ||||| || ||||| ||| || || | || || || | | |||| |||| | Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062 Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482 || | |||||||| || || || |||||||| || | | ||||| | ||| ||| || Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002 Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542 || ||||| |||| ||||| || | |||| |||| |||||| ||| || ||| Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942 Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTC 48602 ||| | |||||||||||| | | |||| ||||||| |||||| | || ||| Sbjct 145941 GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTC 145882 Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662 || || ||||| | | | ||||| || |||| ||| || ||||| | ||||| || ||| Sbjct 145881 AGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGAT 145822 Query 48663 GCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATA 48716 || | | || ||||||| | | ||||||||| |||| ||| ||||||| Sbjct 145821 GCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATT--GAAAATA 145770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694264520125120