Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq738 304 2e-77 seq2120 161 1e-34 >seq738 Length=407637 Score = 304 bits (336), Expect = 2e-77 Identities = 594/874 (68%), Gaps = 8/874 (1%) Strand=Plus/Plus Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397 |||||| ||||||| || | || || || ||||| || || |||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457 ||||| ||||| || |||||| |||||| ||||| ||| | |||| | ||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418 Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517 | |||||| ||||| ||| |||||| | |||| | ||||||| |||| | Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478 Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || || |||| | ||| || ||||| ||| ||||||| || || ||| |||||| Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTT---AAACATTAAACATGC 46634 || || || ||| | | ||| | |||| ||| | | | | |||||| Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598 Query 46635 AAAATCACAATG-AAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 ||| |||||||| ||||||| |||||||||| || | ||| ||| || || | || | Sbjct 114599 AAATTCACAATGTAAGGCCT-CATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTG 114657 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 |||| | ||||||||| | ||||||||| || || ||| ||||| ||||| || | Sbjct 114658 GCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCC 114717 Query 46754 CTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCC 46810 |||| || | || || || || | || |||| || |||| | || | || | || Sbjct 114718 CTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATAT 114777 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | | | ||||| ||||||| ||| |||| || || ||||| || ||||| | Sbjct 114778 ATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAA 114837 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 || || || | ||| || || | | || |||| ||| | |||||||| |||| Sbjct 114838 GATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCTCTG 114897 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 |||| || ||||| |||| | ||||| | ||| ||| |||| |||||| | || |||| Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957 Query 46991 CCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 | ||| | |||| |||| |||||| ||| || ||| ||| | |||||||| Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCAAAAA 115017 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 |||| | | |||| ||||||| ||||||||| | ||||| || ||||| | | | | Sbjct 115018 ATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGTAA 115077 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 |||| || |||| ||| || ||||| | ||||| || || || | | || ||||||| Sbjct 115078 TATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATACT 115137 Query 47171 TATTCCATATATCACGATATTGGATCGGAAAAAT 47204 | | ||||||||| | ||| || ||||| || Sbjct 115138 TGTACCATATATCGGGGTATAATATTGGAAATAT 115171 Score = 282 bits (312), Expect = 6e-71 Identities = 1154/1792 (64%), Gaps = 89/1792 (5%) Strand=Plus/Plus Query 75500 ATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATG 75559 ||||||| ||||| |||||| || || | | |||||||| ||||| | | || Sbjct 382938 ATATTCAATGACTGCGATTGATCAATAAACGGTGCTCTATCAATAGCCATATCAACAAGT 382997 Query 75560 GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GAT 75617 ||||| |||| ||| ||||| | ||| | || || || | || | || | ||| Sbjct 382998 GTCTTCTGAGAAATCTCCCATACTGTTCTATAACATTTCTTCAGATAAGAAGGTATCGAT 383057 Query 75618 TTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCT-TGATCTCATCATTCCA 75675 || |||||||||| ||||| | |||||| | || | | || | ||||||||| Sbjct 383058 TTTATATTTTGAATTGATCCATTGTTCCTCATAATT-TCTTGTCTCATTTTATCATTCCA 383116 Query 75676 CAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGA 75735 | || | ||| || | | | || ||| | ||| ||||| | ||||| Sbjct 383117 AAGCCCAGCCTGAATCAAATCTTTCATTAAATATTTATTTATAATCTGAAACTGACCAGA 383176 Query 75736 CAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 75795 || || || || |||||||| || |||||| | ||||||| || || || Sbjct 383177 TAAAACCTGTCTTGTATAAATATTTGAAGTTATTGGTTCAATTGATTCATAATTGCCTAA 383236 Query 75796 AATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 75855 |||||| | ||| || || || ||||| |||| | |||| | |||| | |||| Sbjct 383237 AATTTGTGAAGTGGATGCGGTAGGCATTTGTGCAATTAATAGAGAGTTTCGAATTCCATA 383296 Query 75856 TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCA 75915 | | ||||| | | ||| |||| | |||||| || | || ||| || ||| Sbjct 383297 TTTACTGATATCTTTTTTCAGATTATCCCAATCAAGAAACTGGGAGGGTTGTTTATTCCA 383356 Query 75916 GAGATCGTATTGTAGAATTCCGTTGCT-AGCATATGATCCATTATATGTTTCGTAAGTCC 75974 ||||| || || | || || ||||| || | | ||| |||| | || | Sbjct 383357 TAGATCATACTGCAAAAAGCCCTTGCTGAGTGGACTA-CCAATATAACTGGGATATTGTC 383415 Query 75975 CGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAA 76034 | || ||| ||| ||||| || || || || | | | ||||| | ||||| || | Sbjct 383416 CATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCATAATAGAGAGTTTCAAATA 383475 Query 76035 TCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATG 76094 | |||||||| | | | ||| ||| || | || | ||||| || ||| Sbjct 383476 TTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAAATCATGAATA 383535 Query 76095 CATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAG 76154 ||| |||| ||||||| ||| || ||||||||||||| | | ||||| |||| ||| | Sbjct 383536 GATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTTGAAAATTCTG 383595 Query 76155 CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT---TCTGACAACTA 76211 |||| || | |||||||| ||||| || | |||||| ||||| | | |||||| Sbjct 383596 TAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGTGTAACAACTT 383655 Query 76212 CTTTAACCACGTCCTTTAGTTTGAGAAAATCAAAT---TTTCCAT------CTATCACAA 76262 | ||||| ||| | | ||| |||||||||| || ||| |||| || Sbjct 383656 TTGTAACC-TGTC--TCAATTTATAAAAATCAAATACATTATCATTGGGAACTAT---AA 383709 Query 76263 ACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCA--TTAGCATTGGCATA 76320 | |||||| ||||| || || |||||||| || || | ||| || || | | | Sbjct 383710 ATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT--GAAAA 383767 Query 76321 TTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCT 76380 ||||| || || || |||| ||||| || || || ||||| | ||| |||||| Sbjct 383768 TTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGTTAGA 383827 Query 76381 CTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGT--TCCAGTTTCAATCTGTGAT 76438 |||| | ||| |||| |||| |||| | | || |||||||||||| || Sbjct 383828 CTTTCTATTAATACTATCCT--TAAATAACATATAGGGTAATCCAGTTTCAATTTGACTA 383885 Query 76439 TCGATAATAGATTTCCAGACGA---CTCTAGCTTTTATTATAGATTTGTATCGCTTCTCT 76495 || || || |||| || | |||| || | |||| |||| ||| ||| Sbjct 383886 TCAATTAT---TTTCATGAACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTTTTCT 383942 Query 76496 CTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGA 76555 |||||||||| ||||| |||||| |||| |||||||| || | | ||| Sbjct 383943 TGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAACGTCTGATAGATTTGGA 384002 Query 76556 CATTCATTCGGACACATCAATGACCA---CTCACCATCTTCCTTAACCCGTTTCATAAAG 76612 |||| ||| |||||||| || ||| ||| || |||| |||| |||||| Sbjct 384003 CATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCC---ACCCTAGACATAAAT 384059 Query 76613 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTA 76672 ||||||| | ||| ||| || |||| ||||| | |||| |||| ||||| || || Sbjct 384060 AGATCAGACAACCAAAGACCATAGAATAAATCTCTTGCTCTAAGTTCATCATTGCCAATA 384119 Query 76673 TTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 76732 || ||||| | || | || | || ||||||| |||||||| |||| ||| || || Sbjct 384120 TTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATAGATTGCA 384179 Query 76733 ATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT--ATAAA 76790 || | || ||||| || ||||||||||| | |||| ||| | |||| ||||| Sbjct 384180 ATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATTAAATAAA 384236 Query 76791 CTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTG---TTCCAG---AAA---TAT 76841 | |||| | || |||| |||||||| |||| ||| ||| Sbjct 384237 C-----GAATTGTAGAAA-----TTAG----ACCATTTGAAACCCCAGGATAAATTTTAT 384282 Query 76842 AACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGA 76901 | | | ||| ||| | | || || || ||||| || ||| ||||| | Sbjct 384283 CATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATATTAGATA 384342 Query 76902 TTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCA---TCCATCATGT 76958 ||| |||||| ||| | ||| ||||| || || || |||| |||| | || Sbjct 384343 TTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCCA--AAGT 384400 Query 76959 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAG 77018 ||| || |||||| || | || ||| || || ||| | |||||| | | |||||||| Sbjct 384401 TAATAA-AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAGGAG 384459 Query 77019 ATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATA- 77077 |||||||||| | |||||| || || |||| || ||||| | | | || ||| Sbjct 384460 TTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAATAT 384519 Query 77078 ---TCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 | ||||| || | ||| | || | ||| |||||||| ||||||| ||| | | Sbjct 384520 TGTTACCATT----TATACTTACCGATACTCTCATAAACATATGTTGAGGTCTTTCAATA 384575 Query 77135 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 77194 | ||||| ||||||| | ||||||| |||| || |||||| | |||||||| | Sbjct 384576 ATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCAAAATATGTA 384635 Query 77195 TATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATT 77246 || | | ||||| || ||| | | | ||||||| || || |||||| Sbjct 384636 AATTCATAATCTCTATCATAATTTAACATGGAATTTATTTGATC--TATATT 384685 >seq2120 Length=154726 Score = 161 bits (178), Expect = 1e-34 Identities = 235/332 (71%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 46852 GTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATT 46911 || ||||| || ||||| ||| || || | ||| || || | | || |||| | Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062 Query 46912 AAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACAT 46971 || | |||||||| |||||||| || ||||| |||| | ||||| | ||| ||| || Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002 Query 46972 CTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATT 47031 || |||||| | || ||||| ||| | |||| |||| |||||| ||| || ||| Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942 Query 47032 CCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTC 47091 ||| | |||||||||||| | | |||| ||||||| ||||||||| | ||| Sbjct 145941 GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTC 145882 Query 47092 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGAC 47151 || || ||||| | | | ||||| || |||| ||| || ||||| | |||||||| || Sbjct 145881 AGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGAT 145822 Query 47152 GCCTCTGCTTTTTTATACATATTCCATATATC 47183 || | | || ||||||| | | ||||||||| Sbjct 145821 GCTACAGATTGTTTATACTTGTACCATATATC 145790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712519490002560