Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_031040.1 Length=31987 Score E Sequences producing significant alignments: (Bits) Value seq13052 190 4e-44 seq12081 113 9e-21 >seq13052 Length=1690 Score = 190 bits (210), Expect = 4e-44 Identities = 108/110 (98%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 27863 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 27922 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1297 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 1238 Query 27923 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 27972 |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1237 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188 >seq12081 Length=2162 Score = 113 bits (124), Expect = 9e-21 Identities = 88/102 (86%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 28871 ATGGGAAAATATCGGTTCGGTAGTGGTTGGTTCAACGACAATATATTATTGGAAACGTAC 28930 |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct 1958 ATGGCAAAATATCGGTTCGGTAGTAATTGGTTCAACAACAATATATTATTGGAAACGCAC 1899 Query 28931 TGCATAAAAATATAAAAAATAGGAGAGTAAAATGAATCAAAT 28972 |||||||||| |||||| |||| | ||||| ||| |||| Sbjct 1898 TGCATAAAAA-ATAAAA---AGGAAAATAAAA--AATGAAAT 1863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102180275701404