Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_031040.1
Length=31987
Score E
Sequences producing significant alignments: (Bits) Value
seq13052 190 4e-44
seq12081 113 9e-21
>seq13052
Length=1690
Score = 190 bits (210), Expect = 4e-44
Identities = 108/110 (98%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 27863 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 27922
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 1238
Query 27923 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 27972
|||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1237 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188
>seq12081
Length=2162
Score = 113 bits (124), Expect = 9e-21
Identities = 88/102 (86%), Gaps = 6/102 (6%)
Strand=Plus/Minus
Query 28871 ATGGGAAAATATCGGTTCGGTAGTGGTTGGTTCAACGACAATATATTATTGGAAACGTAC 28930
|||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| ||
Sbjct 1958 ATGGCAAAATATCGGTTCGGTAGTAATTGGTTCAACAACAATATATTATTGGAAACGCAC 1899
Query 28931 TGCATAAAAATATAAAAAATAGGAGAGTAAAATGAATCAAAT 28972
|||||||||| |||||| |||| | ||||| ||| ||||
Sbjct 1898 TGCATAAAAA-ATAAAA---AGGAAAATAAAA--AATGAAAT 1863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 102180275701404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |