Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq738 242 4e-59 seq2120 129 6e-25 >seq738 Length=407637 Score = 242 bits (268), Expect = 4e-59 Identities = 593/882 (67%), Gaps = 19/882 (2%) Strand=Plus/Plus Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 |||||||||||| | || | |||| || |||||||||||| ||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTT--ACATGATAATTCCTTT 23334 ||||| ||||| || |||||| | ||| || | |||| | || | ||| || Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAAT--CTTTGAATATCCAAGTTCAATT 114416 Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT-AGTTTATACCTAT 23393 || | ||||| || |||||| ||||| | | ||| | || | | || | ||||| Sbjct 114417 AATAATCTATCAGCAACAAATCTTATATAATTAATCAT-AGATGAGCAATTCAAACCTAA 114475 Query 23394 TAGTTTTACTGGAATCGCATCATATAAGAA-TAGTTTTTCAATGGAAACAGCATCTTTAA 23452 | || || || | | || | | |||| | | |||||| ||| || || | | Sbjct 114476 AATTTCAACGGGTAATGACTC-TGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTA 114534 Query 23453 TTATTTGAACAATAACTTCT--TCACTAGGTGGATATTTTAAATACTT---AAACAATAA 23507 ||||| ||| || | ||| ||| | || ||||||||| || | | || | Sbjct 114535 TTATT-GAATAA-ACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAG 114592 Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||||||||| |||||||||| | | ||||| ||||| || | ||||||| || ||||| Sbjct 114593 ACATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAA 114652 Query 23568 TCCTGGCATTAATCCT-CGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGA 23626 |||||||| ||| | || ||||| | |||||||||||| ||||| || || |||| Sbjct 114653 ACCTGGCAT-AATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGA 114711 Query 23627 AAATACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAATGTTGCATTATAATCA 23685 |||| || ||||| | ||||| || || | || | | | ||| ||| ||| | |||| Sbjct 114712 AAATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAAC-TTGAATTTTGATCA 114770 Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745 | || |||| |||| ||| | |||| | ||| | || || || ||||| Sbjct 114771 TATATATATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCG 114830 Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 || || ||| | | || | || || | ||| | || || | || ||| |||||| Sbjct 114831 TTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATAC 114890 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 || || ||||| |||||||| |||| | ||||| | || ||| ||||||||||| Sbjct 114891 ATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATG 114950 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 | ||| || || | || ||||||| | ||||| || |||||| ||| | | Sbjct 114951 ATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAA 115010 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAA 23985 ||||| || ||||||| || | |||||||||| ||||||| | || | || |||||| Sbjct 115011 GCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAA 115070 Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGC 24045 | | ||||||| || |||| ||| || || || ||||||||| ||| | | | Sbjct 115071 TGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGT 115130 Query 24046 TTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATT 24087 |||||| | ||| ||||| | | ||||||||||||| Sbjct 115131 TTATACTTGTACCATATATCGGGGTATAATATTGGAAATATT 115172 >seq2120 Length=154726 Score = 129 bits (142), Expect = 6e-25 Identities = 233/340 (69%), Gaps = 7/340 (2%) Strand=Plus/Minus Query 23754 AAAAGTTTTTTCTTCATTATCTGT------TATATATGTATCAATTAGTAAACTATACAT 23807 ||||| | |||||| | |||||| ||| | || || | || ||| |||||||| Sbjct 146106 AAAAGATGATTCTTC-TGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACAT 146048 Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867 || ||||| |||||||| |||| | ||||| | || ||| ||||||||||| | Sbjct 146047 CTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGAT 145988 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 ||| || || | || ||||||| | ||||| || |||||| ||| | ||| Sbjct 145987 TTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGC 145928 Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 ||| || ||||||| || | |||||||||| ||||||| | || | || ||||||| Sbjct 145927 AAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATG 145868 Query 23988 ATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTT 24047 | ||||||| || |||| ||| || || || ||||| ||| ||| | | | || Sbjct 145867 AGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGATGCTACAGATTGTTT 145808 Query 24048 ATACATTAGCCAAATATCATTATGTTGTATTGGAAATATT 24087 |||| | ||| ||||| | | ||||| ||||||| Sbjct 145807 ATACTTGTACCATATATCGGGGTATAATATTGAAAATATT 145768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521184507021200