Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq738 242 4e-59
seq2120 129 6e-25
>seq738
Length=407637
Score = 242 bits (268), Expect = 4e-59
Identities = 593/882 (67%), Gaps = 19/882 (2%)
Strand=Plus/Plus
Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276
|||||||||||| | || | |||| || |||||||||||| ||||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTT--ACATGATAATTCCTTT 23334
||||| ||||| || |||||| | ||| || | |||| | || | ||| ||
Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAAT--CTTTGAATATCCAAGTTCAATT 114416
Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT-AGTTTATACCTAT 23393
|| | ||||| || |||||| ||||| | | ||| | || | | || | |||||
Sbjct 114417 AATAATCTATCAGCAACAAATCTTATATAATTAATCAT-AGATGAGCAATTCAAACCTAA 114475
Query 23394 TAGTTTTACTGGAATCGCATCATATAAGAA-TAGTTTTTCAATGGAAACAGCATCTTTAA 23452
| || || || | | || | | |||| | | |||||| ||| || || | |
Sbjct 114476 AATTTCAACGGGTAATGACTC-TGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTA 114534
Query 23453 TTATTTGAACAATAACTTCT--TCACTAGGTGGATATTTTAAATACTT---AAACAATAA 23507
||||| ||| || | ||| ||| | || ||||||||| || | | || |
Sbjct 114535 TTATT-GAATAA-ACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAG 114592
Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567
||||||||| |||||||||| | | ||||| ||||| || | ||||||| || |||||
Sbjct 114593 ACATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAA 114652
Query 23568 TCCTGGCATTAATCCT-CGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGA 23626
|||||||| ||| | || ||||| | |||||||||||| ||||| || || ||||
Sbjct 114653 ACCTGGCAT-AATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGA 114711
Query 23627 AAATACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAATGTTGCATTATAATCA 23685
|||| || ||||| | ||||| || || | || | | | ||| ||| ||| | ||||
Sbjct 114712 AAATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAAC-TTGAATTTTGATCA 114770
Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745
| || |||| |||| ||| | |||| | ||| | || || || |||||
Sbjct 114771 TATATATATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCG 114830
Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805
|| || ||| | | || | || || | ||| | || || | || ||| ||||||
Sbjct 114831 TTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATAC 114890
Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865
|| || ||||| |||||||| |||| | ||||| | || ||| |||||||||||
Sbjct 114891 ATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATG 114950
Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925
| ||| || || | || ||||||| | ||||| || |||||| ||| | |
Sbjct 114951 ATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAA 115010
Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAA 23985
||||| || ||||||| || | |||||||||| ||||||| | || | || ||||||
Sbjct 115011 GCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAA 115070
Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGC 24045
| | ||||||| || |||| ||| || || || ||||||||| ||| | | |
Sbjct 115071 TGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGT 115130
Query 24046 TTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATT 24087
|||||| | ||| ||||| | | |||||||||||||
Sbjct 115131 TTATACTTGTACCATATATCGGGGTATAATATTGGAAATATT 115172
>seq2120
Length=154726
Score = 129 bits (142), Expect = 6e-25
Identities = 233/340 (69%), Gaps = 7/340 (2%)
Strand=Plus/Minus
Query 23754 AAAAGTTTTTTCTTCATTATCTGT------TATATATGTATCAATTAGTAAACTATACAT 23807
||||| | |||||| | |||||| ||| | || || | || ||| ||||||||
Sbjct 146106 AAAAGATGATTCTTC-TGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACAT 146048
Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867
|| ||||| |||||||| |||| | ||||| | || ||| ||||||||||| |
Sbjct 146047 CTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGAT 145988
Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927
||| || || | || ||||||| | ||||| || |||||| ||| | |||
Sbjct 145987 TTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGC 145928
Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987
||| || ||||||| || | |||||||||| ||||||| | || | || |||||||
Sbjct 145927 AAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATG 145868
Query 23988 ATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTT 24047
| ||||||| || |||| ||| || || || ||||| ||| ||| | | | ||
Sbjct 145867 AGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGATGCTACAGATTGTTT 145808
Query 24048 ATACATTAGCCAAATATCATTATGTTGTATTGGAAATATT 24087
|||| | ||| ||||| | | ||||| |||||||
Sbjct 145807 ATACTTGTACCATATATCGGGGTATAATATTGAAAATATT 145768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521184507021200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |