Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1320 131 2e-25
seq1979 105 6e-18
seq1095 105 6e-18
>seq1320
Length=267419
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||||||| || ||| ||||||||| || |||||||||||
Sbjct 96569 CCACCACGGAGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGAC 96510
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || | |||||| || ||||| ||||| ||||| ||||| | |||
Sbjct 96509 AGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGA 96450
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||| ||| |||||| ||||| | | ||||| | ||| ||
Sbjct 96449 ATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACT 96390
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || ||||| ||||| ||||||||||||||
Sbjct 96389 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96343
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || ||||| || || |||||||| || ||||||||||| || || ||
Sbjct 95876 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 95817
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | ||||
Sbjct 95816 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 95757
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| |||||| ||||| | | ||||| | ||| || || | ||
Sbjct 95756 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACTTCAAGAGTG 95697
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || ||||| ||||| ||||||||||||||
Sbjct 95696 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 95659
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || ||||| || || |||||||| || ||||||||||| || || ||
Sbjct 96104 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 96045
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | ||||
Sbjct 96044 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 95985
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| |||||| ||||| | | ||||| | ||| || || | ||
Sbjct 95984 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACTTCAAGAGTG 95925
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || ||||| ||||| ||||||||||||||
Sbjct 95924 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 95887
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || ||||| || || |||||||| || ||||||||||| || || ||
Sbjct 96332 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 96273
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | ||||
Sbjct 96272 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 96213
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| |||||| ||||| | | ||||| | ||| || || | ||
Sbjct 96212 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACTTCAAGAGTG 96153
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || ||||| ||||| ||||||||||||||
Sbjct 96152 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96115
Score = 102 bits (112), Expect = 8e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || ||||| || || |||||||| || ||||||||||| || || ||
Sbjct 95648 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 95589
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | ||||
Sbjct 95588 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 95529
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| |||||| ||||| | | ||||| | ||| || || | ||
Sbjct 95528 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACTTCAAGAGTG 95469
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || || ||||| || || || ||||||||||| ||
Sbjct 95468 ATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATTTT 95428
>seq1979
Length=171087
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | ||| |||||||| || ||||||||| ||||| ||||||||
Sbjct 87733 CCTCCGCGCAGCCTGAGCACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 87792
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || ||||||||||||||||| |||| |||||||| || | |||
Sbjct 87793 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGATCGGGCGGA 87852
Query 41756 A 41756
|
Sbjct 87853 A 87853
Score = 105 bits (116), Expect = 6e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || | | ||| |||||||| || ||||||||| ||||| ||||||||
Sbjct 152538 CCTCCGCGCAGCCTGAGCACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 152597
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || ||||||||||||||||| |||| |||||||| || | |||
Sbjct 152598 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGATCGGGCGGA 152657
Query 41756 A 41756
|
Sbjct 152658 A 152658
>seq1095
Length=312686
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||||| || || ||| ||||||||| ||||| ||||| || ||||| | | || ||
Sbjct 84676 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCCTC 84617
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||| ||||| || || || | ||| ||||| | |||| | |||||||||
Sbjct 84616 GAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTG 84557
Query 41773 GATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
||| || ||| | | | ||||| || ||||||||||| ||| || || ||
Sbjct 84556 GATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTT 84497
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| |||| ||| || || || |||||||| ||
Sbjct 84496 GCCGGTCAACGTTTTCACAAAGATCTGCATTTT 84464
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734
||||| ||||| ||||| || ||||| | | || ||||||||||| ||||| || ||
Sbjct 78071 TTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAAATA 78012
Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794
|| | ||| ||||| | |||| | ||||||||| ||| || ||| | |
Sbjct 78011 AGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCA 77952
Query 41795 ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854
| ||||| || ||||||||||| ||| || || || || |||| ||| || || ||
Sbjct 77951 ATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAG 77892
Query 41855 ATCTGCATGTT 41865
|||||||| ||
Sbjct 77891 ATCTGCATTTT 77881
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| ||||| ||||| || ||| || |||||||| || ||||| ||
Sbjct 81588 GCCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGA 81529
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| || | | || || ||||| || || ||||| || |||||||| ||||| | ||
Sbjct 81528 CAATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGG 81469
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGC-TTCAACGACGACACAGTGTCGCTCGACTCCA 41813
| | ||||| || ||| | || || |||| | | ||||| | |||||
Sbjct 81468 GATTCCTTCCTTATCT-TGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCA 81410
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || || |||| ||| || ||||| ||||||||
Sbjct 81409 CCTCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| ||||| ||||| || ||| || |||||||| || ||||| ||
Sbjct 88409 GCCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGA 88350
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| || | | || || ||||| || || ||||| || |||||||| ||||| | ||
Sbjct 88349 CAATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGG 88290
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGC-TTCAACGACGACACAGTGTCGCTCGACTCCA 41813
| | ||||| || ||| | || || |||| | | ||||| | |||||
Sbjct 88289 GATTCCTTCCTTATCT-TGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCA 88231
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| || || || || || |||| ||| || ||||| ||||||||
Sbjct 88230 CCTCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462034950629600
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