Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1320 131 2e-25 seq1979 105 6e-18 seq1095 105 6e-18 >seq1320 Length=267419 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||||||| || ||| ||||||||| || ||||||||||| Sbjct 96569 CCACCACGGAGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGAC 96510 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || | |||||| || ||||| ||||| ||||| ||||| | ||| Sbjct 96509 AGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGA 96450 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||| ||| |||||| ||||| | | ||||| | ||| || Sbjct 96449 ATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACT 96390 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || ||||| ||||| |||||||||||||| Sbjct 96389 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96343 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || || |||||||| || ||||||||||| || || || Sbjct 95876 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 95817 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | |||| Sbjct 95816 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 95757 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| | ||| || || | || Sbjct 95756 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACTTCAAGAGTG 95697 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| |||||||||||||| Sbjct 95696 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 95659 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || || |||||||| || ||||||||||| || || || Sbjct 96104 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 96045 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | |||| Sbjct 96044 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 95985 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| | ||| || || | || Sbjct 95984 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACTTCAAGAGTG 95925 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| |||||||||||||| Sbjct 95924 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 95887 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || || |||||||| || ||||||||||| || || || Sbjct 96332 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 96273 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | |||| Sbjct 96272 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 96213 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| | ||| || || | || Sbjct 96212 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACTTCAAGAGTG 96153 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| |||||||||||||| Sbjct 96152 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96115 Score = 102 bits (112), Expect = 8e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || || |||||||| || ||||||||||| || || || Sbjct 95648 AGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGACAGAGTACGA 95589 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || | |||||| || ||||| ||||| ||||| ||||| | |||| | |||| Sbjct 95588 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 95529 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| |||||| ||||| | | ||||| | ||| || || | || Sbjct 95528 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACTTCAAGAGTG 95469 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| || || || ||||||||||| || Sbjct 95468 ATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATTTT 95428 >seq1979 Length=171087 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || | | ||| |||||||| || ||||||||| ||||| |||||||| Sbjct 87733 CCTCCGCGCAGCCTGAGCACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 87792 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||||||||| |||| |||||||| || | ||| Sbjct 87793 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGATCGGGCGGA 87852 Query 41756 A 41756 | Sbjct 87853 A 87853 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || | | ||| |||||||| || ||||||||| ||||| |||||||| Sbjct 152538 CCTCCGCGCAGCCTGAGCACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 152597 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||||||||| |||| |||||||| || | ||| Sbjct 152598 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGATCGGGCGGA 152657 Query 41756 A 41756 | Sbjct 152658 A 152658 >seq1095 Length=312686 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| || || ||| ||||||||| ||||| ||||| || ||||| | | || || Sbjct 84676 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCCTC 84617 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| ||||| || || || | ||| ||||| | |||| | ||||||||| Sbjct 84616 GAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTG 84557 Query 41773 GATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 ||| || ||| | | | ||||| || ||||||||||| ||| || || || Sbjct 84556 GATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTT 84497 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || |||| ||| || || || |||||||| || Sbjct 84496 GCCGGTCAACGTTTTCACAAAGATCTGCATTTT 84464 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||| ||||| ||||| || ||||| | | || ||||||||||| ||||| || || Sbjct 78071 TTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAAATA 78012 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 || | ||| ||||| | |||| | ||||||||| ||| || ||| | | Sbjct 78011 AGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCA 77952 Query 41795 ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854 | ||||| || ||||||||||| ||| || || || || |||| ||| || || || Sbjct 77951 ATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAG 77892 Query 41855 ATCTGCATGTT 41865 |||||||| || Sbjct 77891 ATCTGCATTTT 77881 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||| ||||| || ||| || |||||||| || ||||| || Sbjct 81588 GCCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGA 81529 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || | | || || ||||| || || ||||| || |||||||| ||||| | || Sbjct 81528 CAATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGG 81469 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGC-TTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||| || ||| | || || |||| | | ||||| | ||||| Sbjct 81468 GATTCCTTCCTTATCT-TGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCA 81410 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || |||| ||| || ||||| |||||||| Sbjct 81409 CCTCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||| ||||| || ||| || |||||||| || ||||| || Sbjct 88409 GCCACCACGGAGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGA 88350 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || | | || || ||||| || || ||||| || |||||||| ||||| | || Sbjct 88349 CAATGTCCTGCCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGG 88290 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGC-TTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||| || ||| | || || |||| | | ||||| | ||||| Sbjct 88289 GATTCCTTCCTTATCT-TGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCA 88231 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || |||| ||| || ||||| |||||||| Sbjct 88230 CCTCCAATGTAATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462034950629600