Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq311 89.7 4e-13 >seq311 Length=259814 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | ||| |||||| ||| | | |||||||| ||||| ||| |||| Sbjct 106226 GACAAGGAAGGTATTCCCCCAGATCAGCAACGTTTGATCTTTGCCGGCAAGCAATTGGAG 106167 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | |||| |||||||| ||||||||||| ||| | || |||| || Sbjct 106166 GATGGCCGCACTCTCTCCGACTACAATATCCAGAAGGAATCCACTTTACATTTGGTTCTA 106107 Query 29175 CGATTACGAGGAGG 29188 || || |||||||| Sbjct 106106 CGTTTGCGAGGAGG 106093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428311850684030