Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq282 107 2e-18 >seq282 Length=398316 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| |||| || |||||| || |||||||| ||| |||| || | || ||| Sbjct 140568 ACCAAATGCAATGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTACGTCCATCTTCC 140627 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || || || ||||| || || || || || || | ||||||||||| Sbjct 140628 AGTTGCTTGCCAGCAAAGATCAAACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGG 140687 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | |||| |||| ||||| | |||||| |||||| Sbjct 140688 ATTTTGGCCTTGACGTTTTCGATGGTGTCGGAGGCCTCAACCTCGAGGGTAATGGTCTTG 140747 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || || |||||||| |||||||||||||| || Sbjct 140748 CCGGTGAGAGTCTTGACAAAGATTTGCATTTT 140779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395052925907146