Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq282 86.0 5e-12 >seq282 Length=398316 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||||| |||||||||||||| || |||||||| || || | || ||| Sbjct 140568 ACCAAATGCAATGTAGACTCCTTTTGGATGTTGTAATCGCTCAGGGTACGTCCATCTTCC 140627 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 || || || || ||| | || | | |||||||| ||| | |||||| ||||| Sbjct 140628 AGTTGCTTGCCAGCAAAGATCAAACGTTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGG 140687 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 ||||| || || | ||| || ||| | ||| |||| ||||||||| || Sbjct 140688 ATTTTGGCCTTGACGTTTTCGATGGTGTCGGAGGCCTCAACCTCGAGGGTAATGGTCTTG 140747 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || || | ||| |||||||| ||||||||||| Sbjct 140748 CCGGTGAGAGTCTTGACAAAGATTTGCATTTT 140779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414549426644644