Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq282 105 6e-18 >seq282 Length=398316 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 |||||||||||| |||||||| || ||||| || || ||||||||| |||| ||| | Sbjct 140780 AAAAATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATTACCCTCGAGGTTGAGGC 140721 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | |||||| | | | | || || ||||| || || || ||| | ||| || Sbjct 140720 CTCCGACACCATCGAAAACGTCAAGGCCAAAATCCAAGACAAGGAGGGCATTCCCCCAGA 140661 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||||| | | || | ||| ||||| ||| | ||||||| ||| || |||||| Sbjct 140660 TCAGCAACGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACCCTGAGCGATTA 140601 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| ||||| |||||||| | ||| |||| Sbjct 140600 CAACATCCAAAAGGAGTCTACATTGCATTTGGT 140568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425320019371120