Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq260 91.5 4e-15 >seq260 Length=543572 Score = 91.5 bits (100), Expect = 4e-15 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || ||||| | |||| |||| ||| |||| || |||| | ||||||||| Sbjct 27868 TGCACCTTCCACAAGTTCGGTGCTTCTGGCGAGGTGGAGAAACACGACGCGCTCTGCATC 27809 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481 || || ||| | |||||||||||||||||||||||| | ||||||||||||| Sbjct 27808 CTGCCACTCAACATTGTCAACGAGAAGATCTACATTTTCATGTGGTTCTGGTTCT 27754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479368551000