Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq265 439 2e-117 seq280 159 3e-33 seq339 147 2e-29 seq291 104 2e-16 seq293 96.9 3e-14 seq233 96.9 3e-14 seq260 93.3 3e-13 >seq265 Length=512215 Score = 439 bits (486), Expect = 2e-117 Identities = 997/1481 (67%), Gaps = 24/1481 (2%) Strand=Plus/Minus Query 517247 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 517306 || || |||||||||| || || || |||||||||||||| | ||||| || |||||| Sbjct 404134 GACTTGTCAGCGGCAGAAACGTTCAGGATACCATTGGCATCAATGTCAAAAGTCACTTCA 404075 Query 517307 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 517366 || || || || ||||| | || || || || ||| || | ||| | |||| | Sbjct 404074 ATCTGGGGTACACCTCTTGGTGCTGGAGGAATACCTGTCAGGTCAAACTTGCCCAATGAA 404015 Query 517367 TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGA 517426 | || ||||| || | || |||||||| | | ||| || ||||| | | ||| Sbjct 404014 TGGTTGTCTTTGGTCATGGCTCTCTCACCCTCATAGACTTGAATGGTAACAGCGGGTTGG 403955 Query 517427 TTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATC 517485 || || ||| | || ||||| |||| | | || ||||| || ||||| || | Sbjct 403954 TTGTCCGAAAAGGTGGTAAAGG-TCTGCGTCTGCTTGGTGGGAATGGTAGTGTTCCTCTT 403896 Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 |||| | ||||||| | || || || ||||| | || | || || | ||||| Sbjct 403895 GATAAGAGTGGTCATGACTCCTCCAGCCGTTTCAATTCCCATGCTGAGCGGGGCTACATC 403836 Query 517546 AACTAGGACAATATTTTGA-AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAA 517604 | || | | | | || | | |||| ||| | |||| |||||| || ||||||| Sbjct 403835 CAGCAGAAGTA-AGTCAGAGACGGTCTCATGAGTCTCACCAGTAAGAATGGCAGCTTGAA 403777 Query 517605 TAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCAT 517664 ||| || ||||| || ||||||||||| || || | | || || || | ||| |||| Sbjct 403776 CAGCGGCTCCATAAGCTACAGCTTCATCTGGGTTGATGGATTTGTTGAGATCTTTGCCAT 403717 Query 517665 TGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAAT 517723 ||||||| | | ||| | ||| ||||| ||||| | || ||| ||||| || Sbjct 403716 TGAAAAAGTCGCTCAAAAGCT-TCTGGACCTTGGGAATTCTAGTACTTCCGCCAACCAAA 403658 Query 517724 ACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGT 517783 || || ||||| | || || |||| ||||| ||| || ||||||| |||||| Sbjct 403657 ACGATGTCATGGATTGAGGACTTGTCCATTTTTGCATCTCTCAAGGCTTTTTCCACGGGT 403598 Query 517784 TCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTG 517843 || | | |||| ||||| || | ||||||||||||||| | || | | || || Sbjct 403597 TCCAAAGTTCCTCTGAACAAATCAGCGCAAAGTTCTTCGAATCTTGCGCGTGAAATAGAA 403538 Query 517844 ACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 517903 | |||| || ||||| ||||||||||| | ||||| | | ||||| || | | Sbjct 403537 GTGTAGAAATCGATGCCTTCAAACAAAGAATCGATCTCAATGCTGGCTTGAGCGGATGCA 403478 Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCTG 517961 ||||| | | || || | ||| || |||||||| ||||||| || || | ||| | Sbjct 403477 GATAGAGTTCTCTTGGCTCTTTCGCAAGCTGTCCTCAGTCTTCTCAAAGCCCTCTTGTT- 403419 Query 517962 ATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTT--ACAA 518018 ||| ||| || | || | |||||| || || || |||| | || | || | Sbjct 403418 -TTGGCTCATGTCCTTCTTGTGTTTTCTATTAAACTCCTTCATGAAG---TGGTCAACCA 403363 Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 | || || ||||||||||| |||||||| | || | |||| |||| | || | || Sbjct 403362 GTCGGTTGTCAAAATCTTCGCCTCCCAAATGTGTGTCACCTGCTGTAGACTTGACCTCGA 403303 Query 518079 AAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | | ||| || |||| | | | |||||| || || || || | |||||| | Sbjct 403302 AGATTCCCTCGTCAATGCTTAGGATGGAAACATCAAATGTGCCTCCTCCGAGATCAAAGA 403243 Query 518139 TAAGTACATTCATTTCTTTGT---CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 518195 | || ||||| | ||||| | | | || || || | ||||| || | ||||||| Sbjct 403242 TCAGAACATTGCTCTCTTTCTGACCCTTCTTCTTGTCCAAGCCATAGGCGATGGCAGCAG 403183 Query 518196 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 518255 | || ||||| || || || || | ||||| ||||| ||||| || || || || | Sbjct 403182 CGGTAGGTTCGTTGATGATCCTAAGGACATTGAGACCGGCAATGACACCGGCGTCCTTGG 403123 Query 518256 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTT 518315 ||||||||||||| | |||||| || || || |||||||| | || |||||| || Sbjct 403122 TGGCTTGTCTTTGGGCATCGTTGAAGTAGGCGGGAACAGTGACGACAGCATCACGGACAG 403063 Query 518316 CTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 518375 | |||| | ||| ||| |||| |||||||| | || | |||||| || |||| Sbjct 403062 TATGTCCAAGGTGAGCTTCTGCAGTTTCCTTCATTTTGGTCAAGACCATTGAAGAGATTT 403003 Query 518376 GTTCTGGGGAATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTA--T 518432 || |||| | | | ||||| ||| ||||| | | ||||| || | ||||| | Sbjct 403002 CCTCGGGGGTAAAGTTCTTGGTTTCGCATTTGAACTCA-ACTTCCAATTTGGGTTTTCCT 402944 Query 518433 TACCAA-CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCA 518491 | | | || | ||| || || ||||| ||||||| || |||||| ||| ||| Sbjct 402943 GAGGAGTCCTTGACAACCTTGAAAGGCCACAATTTCATGTCACGTTGAACGGTTTCGTCC 402884 Query 518492 TTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCA 518551 | ||| | ||| ||||| |||| || ||||| || | || ||| ||||| || || Sbjct 402883 TCAAATTTTCTTCCAATCAATCTCTTGGCATCGAATACCGTGTTGACCGGATTCATAGCT 402824 Query 518552 GCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGAT 518611 |||| | ||||| ||||| || |||| | | || || || ||||| | ||||||||| Sbjct 402823 ACTTGGTTCTTGGCGGCATCGCCGATCAAACGCTCGGTGTCGGTAAAGGCCACATATGAT 402764 Query 518612 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA 518671 || || |||||||||||||| || || || | | ||| ||||| |||| ||| | || Sbjct 402763 GGGGTAGTGCGATTACCTTGGTCGTTTGCCAGGACTTCCACTTTGCCATGTTGGAAAACT 402704 Query 518672 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 || |||||||| | || ||||| | ||| || |||||||| Sbjct 402703 CCGACACAACTGTAGGTGGTTCCCAGATCGATTCCAATAGC 402663 >seq280 Length=401676 Score = 159 bits (176), Expect = 3e-33 Identities = 443/674 (66%), Gaps = 4/674 (1%) Strand=Plus/Minus Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 517272 ||| ||||| || || || || |||| || || || || |||||| || || | Sbjct 224079 ATTGGTAATGGTGATCTTGTTTTGTTTGCCTGAAGACTTGTCCATGGCAGTAACGTTCAA 224020 Query 517273 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 517332 || ||||||||||| | ||||| || ||||| ||||| || || || | ||||||| Sbjct 224019 GATTCCATTGGCATCGATGTCAAAAGTCACTTCGATTTGGGGAACTCCACGTGGAGCAGG 223960 Query 517333 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 517392 || || || || | ||| | || || || ||||| || || | | || ||| Sbjct 223959 AGGTATACCGGTCAGCTCAAACTTGCCAAGCAAGTTGTTATCCTTGGTCATTGCTCTTTC 223900 Query 517393 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 517452 ||| || || | ||| || ||| ||| ||| || || |||||||| || || | | | Sbjct 223899 ACCTTCAAATACTTGAATCAAGACTCCAGGTTGGTTGTCAGAATAAGTGGTGAA-AGTTT 223841 Query 517453 G-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511 | | || ||| |||||| |||||||| | | ||| | | ||||| | ||| || | Sbjct 223840 GAGTTTGTTTGGTAGGAATAGTTGTGTTGCGCTTAATCAAAGAAGTCATTACACCTCCAG 223781 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 | ||||| | ||| | | | || |||||||| | || | | || ||||| || Sbjct 223780 CAGTTTCAATACCCAAACTCAAGGGTGTGACATCCAAAAGCAACAAATCTTGAACAGCTT 223721 Query 517572 CA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 || | ||| | ||| ||| || ||||||| ||| || ||||| || ||||||||| Sbjct 223720 CAGATTGATTGCCTTGCAA-AATGGCAGCTTGAACAGCTGCTCCATAAGCTACAGCTTCA 223662 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || ||||| | | || || | || ||| |||||||| |||| | || | || | Sbjct 223661 TCCGGATTGATGGATTTGTTCAATTCTTTGCCATTGAAGAAATCTTGCAGTAATTTTTGG 223602 Query 517691 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750 ||||| || || |||| ||| ||||| | || |||||||| | | || || ||| Sbjct 223601 ACCTTGGGGATTCGAGTACTTCCGCCAACCAGGACGATTTCATGAATATCAGACTTGTCC 223542 Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAA 517810 | || | ||| || || ||| || ||||| | |||| |||| || | Sbjct 223541 ATCTTGGCATCGCGCAATGCTCGTTCCACAGGTTCCATGGTACCTCTGAACAGATCGGCG 223482 Query 517811 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAA 517870 || | |||||||||| ||||| ||| | | | | |||| || |||||||| | Sbjct 223481 CACAATTCTTCGAATCGAGCTCGAGTCACCGAGGTGTAGAAATCGATGCCTTCGAAAAGC 223422 Query 517871 GAATCAACTTCAAT 517884 || |||| ||| || Sbjct 223421 GAGTCAATTTCTAT 223408 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 ||||||| || || | || || || || |||||| ||| |||||||||||||||| | Sbjct 221718 CAAAAATGGTGTTTGAGGGGTTCATCGCCACTTGATTTTTCGCTGCATCTCCAATCAAAC 221659 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || | || | || | ||| || || || ||||| || || ||||||||||| || | Sbjct 221658 GCTCGGAATCATTGAAAGCAACGTACGAAGGTGTTGTTCGGTTTCCTTGATCATTAGCGA 221599 Query 518643 TAATTTCAACTTTACCATT 518661 | ||||||||||| | ||| Sbjct 221598 TGATTTCAACTTTGCTATT 221580 >seq339 Length=181545 Score = 147 bits (162), Expect = 2e-29 Identities = 567/877 (65%), Gaps = 24/877 (3%) Strand=Plus/Minus Query 517771 TTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGC 517830 ||| || || ||||||||| |||| |||| ||||| ||||| || || || | || Sbjct 140045 TTTCTCCACAGGTTCAAGAGTACCTCTGAACAGATCTGAGCAAAGCTCCTCAAACCTGGC 139986 Query 517831 TCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 517888 ||| || || | || || |||| ||||| ||||| | |||| |||||| | Sbjct 139985 CTGAGT--GATGGAAGTGTAGAAGTCAAGACCTTCAAACAAGTAGTCAATTTCAATGTTG 139928 Query 517889 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGT 517948 | ||||| |||| || | | ||| |||||||| || | || ||||| | | || Sbjct 139927 GCTTGAGCGGAAGCTGACAAGGTACGCTTAGCACGCTCGCGAGCAGTCCTCAAGCGTCTG 139868 Query 517949 AAGGCTT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACAC 518006 | || ||| | ||| ||| || | || | ||| || | ||| || | | Sbjct 139867 ACAGCACACTTGTT--TTGGCTCATGTCCTTCTTGTGTTTCCTTTGGAATTCCTTGAGGA 139810 Query 518007 ACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGT 518064 | || | || | | | ||||| ||||| ||||| ||||| | || | ||| | || Sbjct 139809 AG--TGGTCAACCATATGGTTATCGAAATCCTCACCACCCAAATGGGTGTCTCCAGCAGT 139752 Query 518065 AGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACC 518124 | | | |||| || | ||| ||||||| | ||| | | | ||||| |||||| || Sbjct 139751 GGATTTGACTTCAAAGATTCCGTCTTCAATGGTCAAGATACTGACATCGAAGGTTCCGCC 139692 Query 518125 ACCCATATCAAAAATAAGTACATTCATTTCT-------TTGTCTTGGTTTTTATCAAGAC 518177 ||||| ||||| || | ||||| ||| || ||| | || |||| | Sbjct 139691 ACCCAAGTCAAAGATCAAAACATTGGCTTCAGCAGACGTTCCCTTCTTCTTGTCCAAG-C 139633 Query 518178 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 518237 |||| || | |||||||| || || || || || || || | || || |||||||||| Sbjct 139632 CATAGGCGATGGCAGCAGCGGTGGGCTCGTTGATGATCCTAAGGACGTTGAGACCAGCAA 139573 Query 518238 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297 | || || || ||||||||||||||||| |||||||| || || |||||||| | Sbjct 139572 TGACACCGGCGTCCTTAGTGGCTTGTCTTTGACTGTCGTTAAAGTAGGCGGGAACAGTGA 139513 Query 518298 TAACGGCATCAGTTACTTCTTTACCAATATA-AGCGCTTGCCGTTTGTTTCATTTTACTT 518356 |||||||| | || ||| || | || || | || || | ||||| || | Sbjct 139512 CGACGGCATCCTTGACAGTTTTGCCCAAGTATTGCTC-AGCAGTCTCCTTCATCTTGGTC 139454 Query 518357 AAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA-TTTTGATATGATAC 518415 || | ||| ||||| | || ||| || | | ||| |||| ||||| | || Sbjct 139453 AAGACCATGGATGAGACTTCTTCGGGAGTGAAGGTCTTCTTTTCACATTTGA-ACTCCAC 139395 Query 518416 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGA 518475 || | | || || || | | ||||| || ||||| | ||||| || Sbjct 139394 TTGGATTTTGGGCTTGGCGCCTGCGGGCACAACTTCGAAGGGCCAATGCTTCATGTCCCT 139335 Query 518476 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 518535 ||| ||| | ||| | ||||| | ||| || || || || || || || | || || Sbjct 139334 TTGGACAGTGGTGTCGGTGAAATCCCGACCGATCAAACGCTTGGCGTCGAAGACGGTGTT 139275 Query 518536 GGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 518595 | | || || || || |||| | ||| || ||||| || |||| | | || || || || Sbjct 139274 GTTGGGGTTCATGGCCACTTGGTTTTTAGCGGCATCGCCGATCAAACGCTCGGTGTCGGT 139215 Query 518596 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 || | |||||| ||||||||||| || ||||| ||| Sbjct 139214 GAAGGCAACATAAGATGGAGTTGTTCGGTTACCCTGA 139178 Score = 87.8 bits (96), Expect = 1e-11 Identities = 208/308 (68%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 517591 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 517650 ||| || ||||| | |||||| ||||| || || |||||||| || || | | | || Sbjct 140976 AATGGCGGCTTGGACAGCAGCTCCATAAGCCACGGCTTCATCGGGGTTGATGGACTTGTT 140917 Query 517651 TAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATG 517709 | | || || ||||| || | || | || | ||| | ||| || ||||| | | Sbjct 140916 CAAGTCCTTGCCGTTGAAGAAGTCAGAGATGAGCT-TCTGGATCTTGGGGATACGGGTGG 140858 Query 517710 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAA 517769 ||||||| || || ||||| ||||| | || || |||| ||| | ||| || Sbjct 140857 ATCCTCCGACCAAGACAATGTCATGGATGGCAGACTTGTCCATTTTAGCATCACGCAAGG 140798 Query 517770 CTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAG 517829 ||| || || ||||||||| |||| |||| ||||| ||||| ||||| || | | Sbjct 140797 ATTTCTCCACAGGTTCAAGAGTACCTCTGAACAGATCTGAGCAAAGCTCTTCAAACCTGG 140738 Query 517830 CTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGT 517887 | | ||| || || | || || || | ||||||||||| || |||| |||||| | Sbjct 140737 CCCGAGT--GATGGAAGTGTAGAAGTCCACACCTTCGAACAAGGAGTCAATTTCAATGTT 140680 Query 517888 AGTTTGAG 517895 | ||||| Sbjct 140679 GGCTTGAG 140672 >seq291 Length=339505 Score = 104 bits (114), Expect = 2e-16 Identities = 124/167 (74%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 ||||||||||||| ||| |||| || | | | ||||| | ||| || | Sbjct 312718 GTTCCACCACCCAAATCGAAAACGG---CAATGA---CCTTGTCATCAGATTTGTCCATG 312771 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| || ||||| || ||||| ||||| ||||| | |||||||||||| | ||| ||| Sbjct 312772 CCATAAGCCAAAGCGGCGGCAGTAGGTTCGTTAATCACTCTCAAAACATTCAAACCGGCA 312831 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| ||| ||||| || || ||||||||||| |||||||| || || Sbjct 312832 ATTTGTCCAGCATCCTTGGTAGCTTGTCTTTGGGAATCGTTGAAGTA 312878 >seq293 Length=331714 Score = 96.9 bits (106), Expect = 3e-14 Identities = 166/236 (70%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 |||| ||||||||||||||||| ||| |||||| |||| | | | |||| Sbjct 9884 ACTTCAAATGGCCAGTATTTCAGATCATTTTGAACGGCCGGGTCGGACCATTGGCGACCA 9825 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG-CAGCTTGATATTTGGC 518565 || | || || || |||||||| ||||| | || || | ||| ||| | |||||| Sbjct 9824 ATGAGTCTCTTGGCGTCAAAAATGGTATTTTTGGGGTTGGCAGTCAG-TTGGTTTTTGGC 9766 Query 518566 TGCATCTCCAATCAGATGTTCT--GTC-TCTGTAAATGAAACATATGATGGAGTTGTGCG 518622 |||||| ||||||| ||||| || || || |||| |||||| || || || |||| Sbjct 9765 TGCATCGCCAATCAATCGTTCTCCTTCATCGGTGAATGCAACATAGGAGGGGGTGATGCG 9706 Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678 || ||||| ||||| | ||| ||||| || ||||||| | ||||| |||| Sbjct 9705 GTTTCCTTGCTCATTAGGAATTATTTCTACACGTCCATTTTTCACAACACCAACAC 9650 >seq233 Length=917343 Score = 96.9 bits (106), Expect = 3e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 668854 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACG 668913 ||| || |||||||||||| | || || |||||||| |||||||| ||| | ||||| || Sbjct 515224 AGGCAAGGAAGGTCGTATTCGTGGTAACTTGATGGGCAAACGTGTGGATTTTTCTGCCCG 515165 Query 668914 TACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTAT 668973 || || ||||| |||||||||| || | || |||||||||| || | || Sbjct 515164 AACCGTCATTACACCTGATCCCAACCTTAGGATTGATCAAGTTGGTGTCCCCAGAAGCAT 515105 Query 668974 TGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 |||| |||| | |||||| |||||| || || Sbjct 515104 TGCTCAAAACTTGACTTTTCCCGAAATCGTTAC 515072 >seq260 Length=543572 Score = 93.3 bits (102), Expect = 3e-13 Identities = 121/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || ||||| |||| ||||| | || |||||| |||| | ||| || || || | Sbjct 37098 GTGCCACCGCCCAAGTCAAAGACGAGCACATTCTTTTC---GCCTTCTTTCTTGTCCATT 37042 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| |||| ||| || || || ||||| ||||||||||||| ||| | | ||||||| Sbjct 37041 CCATAGGCAATAGCGGCCGCGGTGGGTTCGTTAATAATTCTCATAACTGTCAAACCAGCA 36982 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 || ||| ||||| || || ||||| | ||| | ||| || || || Sbjct 36981 ATGGCTCCAGCATCCTTGGTAGCTTGACGTTGGGCATCATTGAAGTA 36935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780592842641956