Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq282 82.4 6e-11 >seq282 Length=398316 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 |||||||||||| ||||| || || | || || || ||||||||| ||| || | Sbjct 140780 AAAAATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATTACCCTCGAGGTTGAGGC 140721 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || || | | | ||||| |||||| ||||| ||||| | ||| ||| Sbjct 140720 CTCCGACACCATCGAAAACGTCAAGGCCAAAATCCAAGACAAGGAGGGCATTCCCCCAGA 140661 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||| || | | |||||||| ||||| ||| |||||||| || || |||||| Sbjct 140660 TCAGCAACGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACCCTGAGCGATTA 140601 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| ||||| || ||||| |||| |||| Sbjct 140600 CAACATCCAAAAGGAGTCTACATTGCATTTGGT 140568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425380815943254