Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq282 93.3 7e-14 >seq282 Length=398316 Score = 93.3 bits (102), Expect = 7e-14 Identities = 172/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || || || ||||| | || || ||| || Sbjct 140547 TGCAAATCTTTGTCAAGACCCTGACTGGCAAGACGATTACCTTGGAGGTGGAAGCCTCCG 140488 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || || || ||| ||||| || ||||| || ||||||| Sbjct 140487 ACACAATTGAGAACGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCAGATCAAC 140428 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || |||||| | || ||| | || || |||| ||||| | Sbjct 140427 AACGTTTGATTTTTGCCGGAAAACAACTCGAAGATGGCCGCACATTGTCAGACTATAACA 140368 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG----TAAATAAA-- 146265 | ||||||||||| ||| | ||| | ||| | || || ||||| || |||||||| Sbjct 140367 TTCAAAAAGAATCAACTCTTCATCTTGTACTTCGTTTGAGAGGTGGACACTAAATAAATC 140308 Query 146266 TATTGAAAATT 146276 |||| ||| || Sbjct 140307 TATTCAAACTT 140297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786120939927920