Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq265 439 2e-117 seq280 168 5e-36 seq339 156 3e-32 seq291 105 5e-17 seq293 96.9 3e-14 seq260 93.3 3e-13 seq233 87.8 1e-11 >seq265 Length=512215 Score = 439 bits (486), Expect = 2e-117 Identities = 997/1481 (67%), Gaps = 24/1481 (2%) Strand=Plus/Minus Query 281414 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 281473 || || |||||||||| || || || |||||||||||||| | ||||| || |||||| Sbjct 404134 GACTTGTCAGCGGCAGAAACGTTCAGGATACCATTGGCATCAATGTCAAAAGTCACTTCA 404075 Query 281474 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 281533 || || || || ||||| | || || || || ||| || | ||| | |||| | Sbjct 404074 ATCTGGGGTACACCTCTTGGTGCTGGAGGAATACCTGTCAGGTCAAACTTGCCCAATGAA 404015 Query 281534 TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGA 281593 | || ||||| || | || |||||||| | | ||| || ||||| | | ||| Sbjct 404014 TGGTTGTCTTTGGTCATGGCTCTCTCACCCTCATAGACTTGAATGGTAACAGCGGGTTGG 403955 Query 281594 TTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATC 281652 || || ||| | || ||||| |||| | | || ||||| || ||||| || | Sbjct 403954 TTGTCCGAAAAGGTGGTAAAGG-TCTGCGTCTGCTTGGTGGGAATGGTAGTGTTCCTCTT 403896 Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 |||| | ||||||| | || ||||| ||||| | || | || || | ||||| Sbjct 403895 GATAAGAGTGGTCATGACTCCTCCAGCCGTTTCAATTCCCATGCTGAGCGGGGCTACATC 403836 Query 281713 AACTAGGACAATATTTTGA-AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAA 281771 | || | | | | || | | |||| ||| | |||| |||||| || ||||||| Sbjct 403835 CAGCAGAAGTA-AGTCAGAGACGGTCTCATGAGTCTCACCAGTAAGAATGGCAGCTTGAA 403777 Query 281772 TAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCAT 281831 ||| || ||||| || ||||||||||| || || | | || || || | ||| |||| Sbjct 403776 CAGCGGCTCCATAAGCTACAGCTTCATCTGGGTTGATGGATTTGTTGAGATCTTTGCCAT 403717 Query 281832 TGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAAT 281890 ||||||| | | ||| | ||| ||||| ||||| | || ||| ||||| || Sbjct 403716 TGAAAAAGTCGCTCAAAAGCT-TCTGGACCTTGGGAATTCTAGTACTTCCGCCAACCAAA 403658 Query 281891 ACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGT 281950 || || ||||| | || || |||| ||||| ||| || ||||||| |||||| Sbjct 403657 ACGATGTCATGGATTGAGGACTTGTCCATTTTTGCATCTCTCAAGGCTTTTTCCACGGGT 403598 Query 281951 TCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTG 282010 || | | |||| ||||| || | ||||||||||||||| | || | | || || Sbjct 403597 TCCAAAGTTCCTCTGAACAAATCAGCGCAAAGTTCTTCGAATCTTGCGCGTGAAATAGAA 403538 Query 282011 ACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070 | |||| || ||||| ||||||||||| | ||||| | | ||||| || | | Sbjct 403537 GTGTAGAAATCGATGCCTTCAAACAAAGAATCGATCTCAATGCTGGCTTGAGCGGATGCA 403478 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC--TTTTGCTG 282128 ||||| | | || || | ||| || |||||||| ||||||| || || | ||| | Sbjct 403477 GATAGAGTTCTCTTGGCTCTTTCGCAAGCTGTCCTCAGTCTTCTCAAAGCCCTCTTGTT- 403419 Query 282129 ATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTT--ACAA 282185 ||| ||| || | || | |||||| || || || |||| | || | || | Sbjct 403418 -TTGGCTCATGTCCTTCTTGTGTTTTCTATTAAACTCCTTCATGAAG---TGGTCAACCA 403363 Query 282186 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 282245 | || || ||||||||||| |||||||| | || | |||| |||| | || | || Sbjct 403362 GTCGGTTGTCAAAATCTTCGCCTCCCAAATGTGTGTCACCTGCTGTAGACTTGACCTCGA 403303 Query 282246 AAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAA 282305 | | ||| || |||| | | | ||||||| || || || || | |||||| | Sbjct 403302 AGATTCCCTCGTCAATGCTTAGGATGGAAACATCAAATGTGCCTCCTCCGAGATCAAAGA 403243 Query 282306 TAAGTACATTCATTTCTTTGT---CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAG 282362 | || ||||| | ||||| | | | || || || | ||||| || | ||||||| Sbjct 403242 TCAGAACATTGCTCTCTTTCTGACCCTTCTTCTTGTCCAAGCCATAGGCGATGGCAGCAG 403183 Query 282363 CAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAG 282422 | || ||||| || || || || | ||||| ||||| ||||| || || || || | Sbjct 403182 CGGTAGGTTCGTTGATGATCCTAAGGACATTGAGACCGGCAATGACACCGGCGTCCTTGG 403123 Query 282423 TGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTT 282482 ||||||||||||| | |||||| || || || |||||||| | || ||||| || Sbjct 403122 TGGCTTGTCTTTGGGCATCGTTGAAGTAGGCGGGAACAGTGACGACAGCATCACGGACAG 403063 Query 282483 CTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 282542 | ||||| | ||| ||| |||| |||||||| | || | |||||| || |||| Sbjct 403062 TATGTCCAAGGTGAGCTTCTGCAGTTTCCTTCATTTTGGTCAAGACCATTGAAGAGATTT 403003 Query 282543 GTTCTGGAGAATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTA--T 282599 || || | | | | ||||| ||| ||||| | | ||||| || | ||||| | Sbjct 403002 CCTCGGGGGTAAAGTTCTTGGTTTCGCATTTGAACTCA-ACTTCCAATTTGGGTTTTCCT 402944 Query 282600 TACCAA-CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCA 282658 | | | || | ||| || || ||||| ||||||| || |||||| ||| ||| Sbjct 402943 GAGGAGTCCTTGACAACCTTGAAAGGCCACAATTTCATGTCACGTTGAACGGTTTCGTCC 402884 Query 282659 TTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCA 282718 | ||| | ||| ||||| |||| || ||||| || | || ||| ||||| | || Sbjct 402883 TCAAATTTTCTTCCAATCAATCTCTTGGCATCGAATACCGTGTTGACCGGATTCATAGCT 402824 Query 282719 GCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGAT 282778 |||| | ||||| ||||| || |||| | | || || || ||||| | ||||||||| Sbjct 402823 ACTTGGTTCTTGGCGGCATCGCCGATCAAACGCTCGGTGTCGGTAAAGGCCACATATGAT 402764 Query 282779 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA 282838 || || |||||||||||||| || || || | | ||| ||||| |||| ||| | || Sbjct 402763 GGGGTAGTGCGATTACCTTGGTCGTTTGCCAGGACTTCCACTTTGCCATGTTGGAAAACT 402704 Query 282839 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || |||||||| | || ||||| | ||| || |||||||| Sbjct 402703 CCGACACAACTGTAGGTGGTTCCCAGATCGATTCCAATAGC 402663 >seq280 Length=401676 Score = 168 bits (186), Expect = 5e-36 Identities = 445/674 (66%), Gaps = 4/674 (1%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| || || || || |||| || || || || |||||| || || | Sbjct 224079 ATTGGTAATGGTGATCTTGTTTTGTTTGCCTGAAGACTTGTCCATGGCAGTAACGTTCAA 224020 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 || ||||||||||| | ||||| || ||||| ||||| || || || | ||||||| Sbjct 224019 GATTCCATTGGCATCGATGTCAAAAGTCACTTCGATTTGGGGAACTCCACGTGGAGCAGG 223960 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 || || || || | ||| | || || || ||||| || || | | || ||| Sbjct 223959 AGGTATACCGGTCAGCTCAAACTTGCCAAGCAAGTTGTTATCCTTGGTCATTGCTCTTTC 223900 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||| || || | ||| || ||| ||| ||| || || |||||||| || || | | | Sbjct 223899 ACCTTCAAATACTTGAATCAAGACTCCAGGTTGGTTGTCAGAATAAGTGGTGAA-AGTTT 223841 Query 281620 G-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAG 281678 | | || ||| |||||| |||||||| | | ||| | | ||||| | ||| |||| Sbjct 223840 GAGTTTGTTTGGTAGGAATAGTTGTGTTGCGCTTAATCAAAGAAGTCATTACACCTCCAG 223781 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 | ||||| | ||| | | | || |||||||| | || | | || ||||| || Sbjct 223780 CAGTTTCAATACCCAAACTCAAGGGTGTGACATCCAAAAGCAACAAATCTTGAACAGCTT 223721 Query 281739 CA-TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 || | ||| | ||| ||| || ||||||| ||| || ||||| || ||||||||| Sbjct 223720 CAGATTGATTGCCTTGCAA-AATGGCAGCTTGAACAGCTGCTCCATAAGCTACAGCTTCA 223662 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 || ||||| | | || || | || ||| |||||||| |||| | || | || | Sbjct 223661 TCCGGATTGATGGATTTGTTCAATTCTTTGCCATTGAAGAAATCTTGCAGTAATTTTTGG 223602 Query 281858 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 281917 ||||| || || |||| ||| ||||| | || |||||||| | | || || ||| Sbjct 223601 ACCTTGGGGATTCGAGTACTTCCGCCAACCAGGACGATTTCATGAATATCAGACTTGTCC 223542 Query 281918 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAA 281977 | || | ||| || || ||| || ||||| | | |||| |||| || | Sbjct 223541 ATCTTGGCATCGCGCAATGCTCGTTCCACAGGTTCCATGGTACCTCTGAACAGATCGGCG 223482 Query 281978 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAA 282037 || | |||||||||| ||||| ||| | | | | |||| || |||||||| | Sbjct 223481 CACAATTCTTCGAATCGAGCTCGAGTCACCGAGGTGTAGAAATCGATGCCTTCGAAAAGC 223422 Query 282038 GAATCAACTTCAAT 282051 || |||| ||| || Sbjct 223421 GAGTCAATTTCTAT 223408 Score = 89.7 bits (98), Expect = 4e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 ||||||| || || | || || | || |||||| ||| |||||||||||||||| | Sbjct 221718 CAAAAATGGTGTTTGAGGGGTTCATCGCCACTTGATTTTTCGCTGCATCTCCAATCAAAC 221659 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 | || | || | || | ||| || || || ||||| || || ||||||||||| || | Sbjct 221658 GCTCGGAATCATTGAAAGCAACGTACGAAGGTGTTGTTCGGTTTCCTTGATCATTAGCGA 221599 Query 282810 TAATTTCAACTTTACCATT 282828 | ||||||||||| | ||| Sbjct 221598 TGATTTCAACTTTGCTATT 221580 >seq339 Length=181545 Score = 156 bits (172), Expect = 3e-32 Identities = 569/877 (65%), Gaps = 24/877 (3%) Strand=Plus/Minus Query 281938 TTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGC 281997 ||| || || ||||||||| | |||| |||| ||||| ||||| || || || | || Sbjct 140045 TTTCTCCACAGGTTCAAGAGTACCTCTGAACAGATCTGAGCAAAGCTCCTCAAACCTGGC 139986 Query 281998 TCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 282055 ||| || || | || || |||| ||||| ||||| | |||| |||||| | Sbjct 139985 CTGAGT--GATGGAAGTGTAGAAGTCAAGACCTTCAAACAAGTAGTCAATTTCAATGTTG 139928 Query 282056 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGT 282115 | ||||| |||| || | | ||| |||||||| || | || ||||| | | || Sbjct 139927 GCTTGAGCGGAAGCTGACAAGGTACGCTTAGCACGCTCGCGAGCAGTCCTCAAGCGTCTG 139868 Query 282116 AAGGCTT--TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACAC 282173 | || ||| | ||| ||| || | || | ||| || | ||| || | | Sbjct 139867 ACAGCACACTTGTT--TTGGCTCATGTCCTTCTTGTGTTTCCTTTGGAATTCCTTGAGGA 139810 Query 282174 ACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGT 282231 | || | || | | | ||||| ||||| ||||| ||||| | || | ||| | || Sbjct 139809 AG--TGGTCAACCATATGGTTATCGAAATCCTCACCACCCAAATGGGTGTCTCCAGCAGT 139752 Query 282232 AGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACC 282291 | | | |||| || | ||| ||||||| | ||| | | | ||||| |||||| || Sbjct 139751 GGATTTGACTTCAAAGATTCCGTCTTCAATGGTCAAGATACTGACATCGAAGGTTCCGCC 139692 Query 282292 ACCCATATCAAAAATAAGTACATTCATTTCT-------TTGTCTTGGTTTTTATCAAGAC 282344 ||||| ||||| || | ||||| ||| || ||| | || |||| | Sbjct 139691 ACCCAAGTCAAAGATCAAAACATTGGCTTCAGCAGACGTTCCCTTCTTCTTGTCCAAG-C 139633 Query 282345 CATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAA 282404 |||| || | |||||||| || || || || || || || | || || |||||||||| Sbjct 139632 CATAGGCGATGGCAGCAGCGGTGGGCTCGTTGATGATCCTAAGGACGTTGAGACCAGCAA 139573 Query 282405 TTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | || || || ||||||||||||||||| |||||||| || || |||||||| | Sbjct 139572 TGACACCGGCGTCCTTAGTGGCTTGTCTTTGACTGTCGTTAAAGTAGGCGGGAACAGTGA 139513 Query 282465 TAACGGCATCTGTTACTTCTTTTCCAATATA-AGCGCTTGCTGTTTGTTTCATTTTACTT 282523 |||||||| | || ||| || | || || | || || | ||||| || | Sbjct 139512 CGACGGCATCCTTGACAGTTTTGCCCAAGTATTGCTC-AGCAGTCTCCTTCATCTTGGTC 139454 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCA-TTTTGATATGATAC 282582 || | ||| ||||| | || ||| |||| | ||| |||| ||||| | || Sbjct 139453 AAGACCATGGATGAGACTTCTTCGGGAGTGAAGGTCTTCTTTTCACATTTGA-ACTCCAC 139395 Query 282583 TTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGA 282642 || | | || || || | | ||||| || ||||||| ||||| || Sbjct 139394 TTGGATTTTGGGCTTGGCGCCTGCGGGCACAACTTCGAAGGGCCAATGCTTCATGTCCCT 139335 Query 282643 TTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATT 282702 ||| ||| | ||| | ||||| | ||| || || || || || || || | || || Sbjct 139334 TTGGACAGTGGTGTCGGTGAAATCCCGACCGATCAAACGCTTGGCGTCGAAGACGGTGTT 139275 Query 282703 GGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT 282762 | | || || | || |||| | ||| || ||||| || |||| | | || || || || Sbjct 139274 GTTGGGGTTCATGGCCACTTGGTTTTTAGCGGCATCGCCGATCAAACGCTCGGTGTCGGT 139215 Query 282763 AAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 282799 || | |||||| ||||||||||| || ||||| ||| Sbjct 139214 GAAGGCAACATAAGATGGAGTTGTTCGGTTACCCTGA 139178 Score = 93.3 bits (102), Expect = 3e-13 Identities = 209/308 (68%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 281758 AATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATT 281817 ||| || ||||| | |||||| ||||| || || |||||||| || || | | | || Sbjct 140976 AATGGCGGCTTGGACAGCAGCTCCATAAGCCACGGCTTCATCGGGGTTGATGGACTTGTT 140917 Query 281818 TAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATG 281876 | | || || ||||| || | || | || | ||| | ||| || ||||| | | Sbjct 140916 CAAGTCCTTGCCGTTGAAGAAGTCAGAGATGAGCT-TCTGGATCTTGGGGATACGGGTGG 140858 Query 281877 ATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAA 281936 ||||||| || || ||||| ||||| | || || |||| ||| | ||| || Sbjct 140857 ATCCTCCGACCAAGACAATGTCATGGATGGCAGACTTGTCCATTTTAGCATCACGCAAGG 140798 Query 281937 CTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAG 281996 ||| || || ||||||||| | |||| |||| ||||| ||||| ||||| || | | Sbjct 140797 ATTTCTCCACAGGTTCAAGAGTACCTCTGAACAGATCTGAGCAAAGCTCTTCAAACCTGG 140738 Query 281997 CTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGT 282054 | | ||| || || | || || || | ||||||||||| || |||| |||||| | Sbjct 140737 CCCGAGT--GATGGAAGTGTAGAAGTCCACACCTTCGAACAAGGAGTCAATTTCAATGTT 140680 Query 282055 AGTTTGAG 282062 | ||||| Sbjct 140679 GGCTTGAG 140672 >seq291 Length=339505 Score = 105 bits (116), Expect = 5e-17 Identities = 180/260 (69%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||||||||| ||||| |||||| || || | | |||| || | | Sbjct 312625 TTGTCAAAATCTTCACCACCCAAGAAAGTATTGCCGTTGGTGGACTTGACTTCAAACACT 312684 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || | || | | | || || ||| ||||||||||||| ||| |||| Sbjct 312685 CCTTTTTGGATTTCAAGGACAGAAATATCGAAAGTTCCACCACCCAAATCGAAAACGG-- 312742 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || | | | ||||| | ||| || | ||||| || ||||| || ||||| ||| Sbjct 312743 -CAATGA---CCTTGTCATCAGATTTGTCCATGCCATAAGCCAAAGCGGCGGCAGTAGGT 312798 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || ||||| | |||||||||||| | ||| |||||| ||| ||||| || || |||||| Sbjct 312799 TCGTTAATCACTCTCAAAACATTCAAACCGGCAATTTGTCCAGCATCCTTGGTAGCTTGT 312858 Query 282431 CTTTGTGAATCGTTAAAATA 282450 ||||| |||||||| || || Sbjct 312859 CTTTGGGAATCGTTGAAGTA 312878 >seq293 Length=331714 Score = 96.9 bits (106), Expect = 3e-14 Identities = 166/236 (70%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 282673 |||| ||||||||| ||||||| ||| |||||| |||| | | | |||| Sbjct 9884 ACTTCAAATGGCCAGTATTTCAGATCATTTTGAACGGCCGGGTCGGACCATTGGCGACCA 9825 Query 282674 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTG-CAGCTTGATATTTGGC 282732 || | || || || |||||||| ||||| | || || | | ||| ||| | |||||| Sbjct 9824 ATGAGTCTCTTGGCGTCAAAAATGGTATTTTTGGGGTTGGCAGTCAG-TTGGTTTTTGGC 9766 Query 282733 TGCATCTCCAATCAGATGTTCT--GTC-TCTGTAAATGAAACATATGATGGAGTTGTGCG 282789 |||||| ||||||| ||||| || || || |||| |||||| || || || |||| Sbjct 9765 TGCATCGCCAATCAATCGTTCTCCTTCATCGGTGAATGCAACATAGGAGGGGGTGATGCG 9706 Query 282790 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 282845 || ||||| ||||| | ||| ||||| || ||||||| | ||||| |||| Sbjct 9705 GTTTCCTTGCTCATTAGGAATTATTTCTACACGTCCATTTTTCACAACACCAACAC 9650 >seq260 Length=543572 Score = 93.3 bits (102), Expect = 3e-13 Identities = 121/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 || ||||| |||| ||||| | || |||||| |||| | ||| || || || | Sbjct 37098 GTGCCACCGCCCAAGTCAAAGACGAGCACATTCTTTTC---GCCTTCTTTCTTGTCCATT 37042 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| ||| || || || ||||| ||||||||||||| ||| | | ||||||| Sbjct 37041 CCATAGGCAATAGCGGCCGCGGTGGGTTCGTTAATAATTCTCATAACTGTCAAACCAGCA 36982 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 || ||| ||||| || || ||||| | ||| | ||| || || || Sbjct 36981 ATGGCTCCAGCATCCTTGGTAGCTTGACGTTGGGCATCATTGAAGTA 36935 >seq233 Length=917343 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 |||| ||| || |||||||||||| | || || |||||||| || ||||| ||| | ||| Sbjct 515229 TTGAAAGGCAAGGAAGGTCGTATTCGTGGTAACTTGATGGGCAAACGTGTGGATTTTTCT 515170 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401 || || || || ||||| ||||||| || || | || |||||||||| || Sbjct 515169 GCCCGAACCGTCATTACACCTGATCCCAACCTTAGGATTGATCAAGTTGGTGTCCCCAGA 515110 Query 432402 ATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAAC 432439 | ||||| |||| | |||||| |||||| || || Sbjct 515109 AGCATTGCTCAAAACTTGACTTTTCCCGAAATCGTTAC 515072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740403282949476