Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oithona_20nana_20[genbank_20GCA_5F900157175.1_202017-02-17] 4,626 sequences; 85,010,107 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq275 86.0 1e-11 >seq275 Length=453286 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || || ||| || || ||| | | |||||||| || ||| Sbjct 384439 AAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAGCAACGTTTGATCTTCGCTGGCAAG 384380 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||| ||||| | ||| | | || |||||| ||||||| ||||||||||||||| Sbjct 384379 CAATTGGAGGATGGGCGTACTCTCTCAGACTACAACATCCAGAAGGAGTCTACTCTTCAC 384320 Query 206374 CTTGTTTTGAGACTTCG 206390 | || ||| | ||||| Sbjct 384319 TTGGTGTTGCGTCTTCG 384303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181750752742546