Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq684 158 2e-33 seq638 123 4e-23 seq6499 122 1e-22 seq1665 107 3e-18 seq369 105 1e-17 seq172 86.0 9e-12 >seq684 Length=498857 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || |||||||| || || || || | || |||| || | Sbjct 348738 ATGCAGATTTTTGTGAAAACTCTAACAGGAAAGACCATCACCTTGGAAGTTGAGCCATCT 348797 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| |||||||| |||||||||||||| || || ||||| Sbjct 348798 GATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 348857 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || |||||||| ||||||||||| ||| | ||||| || || |||||| Sbjct 348858 CAGAGGCTAATCTTTGCAGGTAAACAATTAGAAGATGGCCGAACCTTGTCTGACTATAAT 348917 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| ||| | || || ||||| || | || ||||| || Sbjct 348918 ATTCAAAAAGAATCCACTCTTCACTTAGTTTTGCGCCTTCGTGGTGGAAT 348967 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| || || ||||| ||||| ||| | ||| | ||| | Sbjct 349193 AATGCAAATTTTTGTTAAGACTCTTACTGGCAAGACTATTACTCTTGAGGTGGAACCCTC 349252 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | || ||||| ||||| || ||||| || || |||||||| Sbjct 349253 TGACACTATTGAAAATGTTAAGGCTAAAATCCAAGACAAGGAAGGGATTCCCCCTGATCA 349312 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | |||||||| || || || || |||||| |||| |||||| || ||||| Sbjct 349313 GCAACGATTAATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACATTATCTGACTATAA 349372 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| ||| ||||| | || | | ||| |||| ||||| Sbjct 349373 TATTCAAAAGGAATCTACTCTGCATCTTGTCCTTAGGTTAAGAGGAGGTAT 349423 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| ||||||| || |||||||| || || || | || |||| | | Sbjct 348510 ATGCAGATCTTTGTAAAGACTCTCACAGGCAAGACCATCACCTTGGAAGTTGAGCCGTCT 348569 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | || ||||||||| ||||||||||| || || || || ||| Sbjct 348570 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGAATCCCCCCAGACCAA 348629 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || ||||| || || ||||| || ||| | || || | ||| |||||| Sbjct 348630 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCAGACTATAAT 348689 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || ||| | ||| | || | || | |||||||||| Sbjct 348690 ATCCAGAAAGAGTCTACTCTCCATCTTGTCCTTCGACTCAGAGGTGGTAT 348739 Score = 116 bits (128), Expect = 6e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || || || ||||||||||| || |||| ||||| || Sbjct 348965 AATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACTATTACATTAGAAGTTGAACCATC 349024 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | || || || ||||| |||||||| || ||||| ||||| Sbjct 349025 TGACACTATTGAAAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 349084 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||| | || ||||| |||||||| | || ||| | |||| | ||||| || Sbjct 349085 ACAGAGGTTGATATTTGCTGGAAAACAGCTTGAAGATGGAAGAACTCTCTCTGATTACAA 349144 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| |||||||| ||| | ||| | ||| | || | || || || || ||| || Sbjct 349145 CATTCAGAAAGAATCCACTCTTCATCTTGTTCTTCGGCTCCGTGGAGGAATGCAAATTT 349203 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || |||||||| || || || | ||| |||| || Sbjct 349422 ATGCAGATCTTTGTTAAAACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCA 349481 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || |||||||| ||||||||||| || ||||| ||||| Sbjct 349482 GATACGATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAG 349541 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || |||||||| ||||| | |||||| | |||| | ||| || || Sbjct 349542 CAGAGGCTAATCTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 349601 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | ||| | || | ||||| |||| ||||| Sbjct 349602 ATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGGTAT 349651 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || ||||| || || || | || |||| || | Sbjct 349878 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCT 349937 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | || ||||||||| |||||||||||||| || || || ||| Sbjct 349938 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGTATCCCCCCAGACCAA 349997 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || ||||| || || ||||| || ||| | || || | ||| || ||| Sbjct 349998 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGACGTACTCTTTCAGACTACAAT 350057 Query 124719 ATTCAAAAAGAATCAACTTTGCA-TTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| ||| | || ||| | ||| | | | |||| ||||| Sbjct 350058 ATCCAGAAAGAATCTACTCTCCACCTTGTTCTTAGGCTCA-GAGGCGGTAT 350107 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || ||||| || || || | || |||| || | Sbjct 350106 ATGCAGATCTTTGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCT 350165 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| ||||| || |||||||| |||||||| || ||||| ||||| Sbjct 350166 GACACCATCGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAG 350225 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || ||||| || || || | || ||| | || || | || ||||| Sbjct 350226 CAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACGCTCTCTGACTATAAC 350285 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||||| |||||| | ||||| ||| | || | || || ||| Sbjct 350286 ATTCAAAAAGAGTCAACTCTCCATTTAGTTCTGCGACTTCGTGGAGGT 350333 Score = 100 bits (110), Expect = 4e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || ||| |||| ||||| || || || | || | || | Sbjct 348281 AATGCAGATCTTTGTGAAAACATTAACTGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 348340 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || || || || |||||||| || || || || || Sbjct 348341 TGATACCATTGAGAATGTTAAGGCTAAGATCCAGGACAAAGAAGGAATCCCTCCAGACCA 348400 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||| | |||||||| ||||| || | || ||| | ||||| || || ||||| Sbjct 348401 ACAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACGTTGTCTGACTATAA 348460 Query 124718 TATTCAAAAAGAATCAACTTTGCAT 124742 ||| ||||||||||| ||| | ||| Sbjct 348461 TATCCAAAAAGAATCTACTCTTCAT 348485 >seq638 Length=483222 Score = 123 bits (136), Expect = 4e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171880 TTCtttttttATTTTATATTCACCATGTTTTCTAATATTTGGTAAAACTTCATTAGTTAT 171939 ||||||||| | ||||||||| || ||||||||| |||||| |||||| ||||| Sbjct 470649 TTCTTTTTTCAATTTATATTCTCCTGTTTTTCTAATTGTTGGTATTACTTCAAAAGTTAC 470590 Query 171940 CCATTTTTTAAATATTTTAGCTTCTGATTTTTTAGATGATAAAATTAATGAATATAATCC 171999 |||||||||||| ||||||||||| |||||| || |||| ||| |||||||| || Sbjct 470589 CCATTTTTTAAACTTTTTAGCTTCTTCTTTTTTTGAACTAAAAACTAAAGAATATAAACC 470530 Query 172000 AGATTCTGATATATAAATAGTAT 172022 |||||| ||| ||||||||| Sbjct 470529 AGATTCGTTAATAAAAATAGTAT 470507 >seq6499 Length=11414 Score = 122 bits (134), Expect = 1e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || ||||| || || || || |||| | || || | Sbjct 899 ATGCAGATCTTTGTCAAAACTCTCACAGGAAAGACCATCACCTTAGAAGTCGAGCCATCT 840 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| || ||||| |||||||||||||| || || ||||| Sbjct 839 GATACGATTGAAAATGTGAAAGCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 780 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| ||||| || ||||| || | || || | || ||||| Sbjct 779 CAGAGGCTGATCTTTGCTGGAAAGCAGTTAGAAGACGGCCGTACTCTCTCTGACTATAAC 720 Query 124719 ATTCAAAAAGAATCAACTTTGCA-TTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||||||| | || ||| | ||| ||| | |||||||||| Sbjct 719 ATTCAGAAAGAATCAACTCTTCACCTTGTTCTTAGGTTGA-GAGGTGGTAT 670 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || |||||||| || || || | ||| |||| || Sbjct 1355 ATGCAGATCTTTGTTAAGACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCA 1296 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || |||||||| ||||||||||| || ||||| |||||| Sbjct 1295 GATACTATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATCCCACCAGATCAA 1236 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | ||||||||||| ||||| | |||||| | |||| | ||| || || Sbjct 1235 CAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 1176 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | ||| | || | ||||| |||| ||||| Sbjct 1175 ATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGGTAT 1126 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||||| || || || || ||||| | || | || | | Sbjct 443 ATGCAAATCTTTGTTAAAACACTCACTGGTAAGACCATAACCCTGGAAGTGGAGCCGTCT 384 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| ||||| || || || ||||| |||||||| || || ||||| Sbjct 383 GACACAATCGAAAATGTAAAAGCTAAGATACAGGATAAGGAAGGTATTCCTCCAGATCAG 324 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || || || || || || | || ||| | || ||| | ||| || ||| Sbjct 323 CAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGACGTACACTCTCAGACTACAAT 264 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || ||||| | ||| | || | | ||| |||| ||||| Sbjct 263 ATTCAAAAGGAGTCAACCCTCCATCTTGTCCTTAGATTAAGAGGAGGTAT 214 Score = 89.7 bits (98), Expect = 8e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||| ||||| || ||||| ||||| || | || | || | | Sbjct 215 ATGCAGATCTTTGTAAAAACACTTACTGGCAAGACTATTACCTTGGAAGTAGAGCCTTCT 156 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| |||||||| || ||||| ||||| Sbjct 155 GACACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 96 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | ||||||||||| ||||| | |||||| | |||| | ||| || || Sbjct 95 CAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 36 Query 124719 ATTCAAAAAGAATCAAC 124735 || ||||| || || || Sbjct 35 ATACAAAAGGAGTCCAC 19 >seq1665 Length=283950 Score = 107 bits (118), Expect = 3e-18 Identities = 109/137 (80%), Gaps = 5/137 (4%) Strand=Plus/Minus Query 171881 TCtttttttATTTTATATTCACCATGTTTTCTAATATTTGGTAAAACTTCATTAGTTATC 171940 || ||||| | |||| |||| ||| ||||||||| |||||| |||||| ||| | | Sbjct 1074 TCCTTTTTCAATTTACATTCGCCAATTTTTCTAATTGTTGGTAGTACTTCAA-AGTAACC 1016 Query 171941 CATTTTTTAAATATTTTAGCTTCTGATTTTTTAGATGATAAAATTAATGAATATAATCCA 172000 |||||| ||| ||||||||||| ||||||| || | ||||||||||||||||||||| Sbjct 1015 CATTTTAAAAACTTTTTAGCTTCTTTTTTTTTA-ATTA-AAAATTAATGAATATAATCCA 958 Query 172001 GATTCTGATATATAAAT 172017 ||||| || |||||| Sbjct 957 GATTC--ATTCATAAAT 943 >seq369 Length=579016 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171880 TTCtttttttATTTTATATTCACCATGTTTTCTAATATTTGGTAAAACTTCATTAGTTAT 171939 || || |||||| |||| ||| ||| ||||||||| |||||| |||||| ||| || Sbjct 172070 TTGTTATTTTATATTATGTTCCCCAGTTTTTCTAATTGTTGGTATTACTTCAAAAGTAAT 172011 Query 171940 CCATTTTTTAAATATTTTAGCTTCTGATTTTTTAGATGATAAAATTAATGAATATAATCC 171999 |||||||| ||| ||||||||||| ||| || || |||| ||| |||||||| || Sbjct 172010 CCATTTTTAAAACTTTTTAGCTTCTTGTTTATTTGAACTAAAAACTAAAGAATATAAACC 171951 Query 172000 AGATTCTGATATATAAATAGTAT 172022 ||||| | |||| | || |||| Sbjct 171950 AGATTTTTTTATAAATATTGTAT 171928 >seq172 Length=670071 Score = 86.0 bits (94), Expect = 9e-12 Identities = 86/111 (77%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 171907 TTTTCTAATATTTGGTAAAACTTCATTAGTTATCCATTTTTTAAATATTTTAGCTTCTGA 171966 ||||||||| |||||| |||||| ||| |||||||| ||| ||||||||||| Sbjct 29814 TTTTCTAATTGTTGGTAGTACTTCAAAAGTATCCCATTTTTAAAACTTTTTAGCTTCTTC 29873 Query 171967 TTTTTTAGATGATAAAATTAATGAATATAATCCAGATTCTGATATATAAAT 172017 |||||| || ||||| ||||||||||| | ||||||| | ||||||| Sbjct 29874 TTTTTTTGAATTAAAAATAAATGAATATAAACGAGATTCT--TTTATAAAT 29922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755293369209600