Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4446 87.8 2e-12 >seq4446 Length=45416 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 ||||||||||| ||| | || ||| ||| | ||| || |||||| || | || | Sbjct 20944 TTTAAAAATCAGCATCCAAAGTAAAAACACTTTCTGCCTTTGATGACATCAC-GCCAGCT 20886 Query 15945 TT-TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 || || ||||||| ||| | || ||||||||||| ||||| ||||| | |||||||| Sbjct 20885 TTCTGGTATTCACCCACTTTTTTCTCAAAGAAATTAGTTTTGCCTTCAAGTGAAATATGC 20826 Query 16004 TCCATAAAATCAAAAGGATTTTTTG 16028 ||||| || ||||| || ||| ||| Sbjct 20825 TCCATGAAGTCAAATGGGTTTGTTG 20801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462412432729200