Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq295 104 2e-17 >seq295 Length=498498 Score = 104 bits (114), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 37354 CCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCT---AGT 37410 ||||| || || || || | | ||| || |||||||| || ||||||| || Sbjct 330993 CCTTTGCTTGCAGGTGATCCTTCATAAGTTTCATAAGGACCTG---TTTTAGCAGCAAGC 331049 Query 37411 TCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATT 37470 || ||||| | ||||||||| |||| || |||||||| || | ||| ||||||||| | Sbjct 331050 TCACAACTGGCTTCTAGTGCTCCATAGTAAATTGTTTCAAATAGCTGTTTATTTAATAGT 331109 Query 37471 TTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGA 37530 |||||||| || || |||| | | || | ||||| | |||||| || ||||| Sbjct 331110 CCAGCTTCTTCACTTTCAAATGGAAGTCTCATTTGGATAAAAAGATCAGCTAAGCCCTGT 331169 Query 37531 ACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTA 37569 || || ||||| || || | ||| | ||||||||||| Sbjct 331170 ACTCCAATACCAATCGGGCGGTGTCGCATATTAGATCTA 331208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468423938323680