Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq245 96.9 3e-15 >seq245 Length=632274 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 138763 TATATTGGAAGTGCTAATATGGATTGGAGGTCTCTTTCTCAAGTTAAAGAACTTGGTATA 138822 ||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct 185549 TATGTTGGAAGTGCTAATATGGATTGGAGATCTCTGTCTCATGTTAAAGAACTTGGTATT 185608 Query 138823 GGTATTTACAATTCTTCATGTTTGGTAATGGATTTAATAAAAATCTTTAATG--AGTATT 138880 | |||| | || | ||| || | || || | ||||| ||| ||| |||||| Sbjct 185609 GTTATTAAAAACTGTTCTTGCCTTGTGGAAGACATGGCTAAAATATTTGATGTAAGTATT 185668 Query 138881 GTTATAT 138887 |||| || Sbjct 185669 GTTACAT 185675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478485771796080