Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq133 86.0 9e-12 >seq133 Length=922056 Score = 86.0 bits (94), Expect = 9e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 127109 AAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTCACAATGT 127168 |||| ||||| || || |||||||| | ||||||||||| || || || | |||| | Sbjct 544331 AAAATATGACACCAGCCCGAGGACCACGCAGAGTCTTGTGGGTGGTGGTAGAAACAACAT 544390 Query 127169 CACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATGTGTGCAA 127228 | ||| ||||||||| ||| |||||| | |||| || || | | ||| || | Sbjct 544391 GAGCATAGTCAAAGGGGGAAGGTATGACTCCAGCAGCAACCAGCCCTGAGACGTGGGCCA 544450 Query 127229 TATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTATAGTCCA 127288 |||| |||||||| ||| || | |||| |||||||| | ||| | | ||||||| Sbjct 544451 TATCTGCCATCAGGTAGGCTCCCACCTCATCTGCAATCTCCCTGAACCTCTTGTAGTCCA 544510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740899668480720