Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq684 127 1e-24 seq6499 122 6e-23 seq1688 104 2e-17 >seq684 Length=498857 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| ||||| ||||| || ||||||||||| ||| |||| | ||||| Sbjct 349175 AACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATCTTC 349116 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||| ||||| ||||||| | ||||| || ||| |||||||||||||| Sbjct 349115 AAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTG 349056 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| ||| |||| || || || ||| || ||||| ||||| ||||| Sbjct 349055 GATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGTTTT 348996 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| |||||||| ||||| Sbjct 348995 GCCAGTAAGAGTTTTCACAAAAATCTGCAT 348966 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | || | ||| || ||||| || |||||||||||||| || Sbjct 349648 CCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAG 349589 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | || || | ||||| || || | || | | || || || |||| Sbjct 349588 AGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGTGGA 349529 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || |||||| ||| ||| |||| || ||||| || || Sbjct 349528 ATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATCGTATCTGATGGCTCAACC 349469 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||||||||| || ||||| |||||||| ||||| || |||||| Sbjct 349468 TCCAAGGTAATGGTCTTGCCTGTGAGAGTTTTAACAAAGATCTGCATA 349421 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 |||||||| ||||| ||||| |||||||| || || || || | ||| | ||| Sbjct 348949 AAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGTTCGGCCATCT 348890 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGT-C 15270 ||||||||||| || || | || | | || || || ||||| |||||||| | | Sbjct 348889 TCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACCTTCTTTATCC 348830 Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 || ||||||| || ||| |||| || ||||| || || || ||||| ||||| Sbjct 348829 TGAATTTTTGCT-TTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTGATGGT 348771 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| |||||||| |||||||| |||||| Sbjct 348770 CTTTCCTGTTAGAGTTTTCACAAAAATCTGCATA 348737 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | || | ||| | || || || || ||||| || || ||||| || Sbjct 349876 CCGCCTCTGAGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCAGAA 349817 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| ||||| || ||||| | ||||| | |||||||| ||| Sbjct 349816 AGAGTACGGCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGA 349757 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| || || ||||| ||| || ||| | || |||||||| ||| || Sbjct 349756 ATTCCTTCCTTATCTTGTATTTTAGCT-TTAACATTCTCGATGGTATCAGAGGGTTCCAC 349698 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || |||||||| || || |||||||| |||||||| |||||| Sbjct 349697 TTCTAAAGTGATGGTTTTGCCAGTAAGAGTTTTCACAAAAATCTGCATA 349649 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | || | || | ||| || || || ||||| || || || || || Sbjct 348736 CCACCTCTGAGTCGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAA 348677 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| ||||| || ||||| | ||||| | |||||||| || Sbjct 348676 AGAGTACGGCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGG 348617 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || |||||| ||| ||| |||| || ||||| || || Sbjct 348616 ATTCCTTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGACGGCTCAACT 348557 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| ||||| || ||||| ||||| |||||||| || |||||| Sbjct 348556 TCCAAGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAAGATCTGCATA 348509 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||||||||| || || || |||||||| ||||| || || || | | | ||||| Sbjct 350315 AACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAGAGCGTACGGCCATCTTC 350256 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || || ||||| | ||||| | || || || |||||||||||||||||| Sbjct 350255 AAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCTTG 350196 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| ||| |||||| |||| ||||| || || || || ||||| ||||| || Sbjct 350195 AATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTCTT 350136 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||| || ||||| || |||||| Sbjct 350135 GCCAGTAAGAGTCTTAACAAAGATCTGCATA 350105 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/244 (68%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| ||| | || | |||||| || || |||||||| || || || || Sbjct 348508 CCCCCTCTCAGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGAC 348449 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | ||| | ||||| | || || ||||| | ||||| | ||||||||| || Sbjct 348448 AACGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGG 348389 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||||||||| || || ||| ||| | || |||||||| || || Sbjct 348388 ATTCCTTCTTTGTCCTGGATCTTAGCCTTAACATTCTCAATGGTATCAGAGGGCTCCACT 348329 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT-----TGAAA 15371 || ||||| ||||| || || || | ||||| ||||| || ||||| || ||||| Sbjct 348328 TCCAAGGTGATGGTCTTGCCAGTTAATGTTTTCACAAAGATCTGCATTTTTTACCTGAAA 348269 Query 15372 ATAA 15375 |||| Sbjct 348268 ATAA 348265 >seq6499 Length=11414 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| |||||||||| | || | |||||| || || || ||||| ||||||||||| Sbjct 443 TGCCTCCTCTCAATCGAAGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAG 502 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| |||| | ||||| | || || |||||| | ||||| | || || || || Sbjct 503 AGAGAGTTCTTCCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTG 562 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||||||||||||||| || ||| ||| ||| | || || ||||| |||| Sbjct 563 GAATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTA 622 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || | ||| || || || || || || ||||||||||| ||||||||| Sbjct 623 CTTCCAGGGTGATAGTCTTGCCAGTAAGTGTTTTTACAAAGATTTGCATA 672 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | || | ||| || ||||| || |||||||||||||| || Sbjct 1129 CCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAG 1188 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| |||| | || || | ||||| || || | ||||| | ||||| || ||| Sbjct 1189 AGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGGG 1248 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || |||||| ||| ||| |||| || ||||| || || Sbjct 1249 ATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATAGTATCTGATGGCTCAACC 1308 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||||||||| || ||||| ||||| || ||||| || |||||| Sbjct 1309 TCCAAGGTAATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCATA 1356 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| || | ||| | ||||| || || ||||| || ||||| || || Sbjct 673 CCACCTCTCAACCTAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAGAG 732 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | |||||||||| || || ||||| | |||| | || || || ||| Sbjct 733 AGAGTACGGCCGTCTTCTAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 792 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || ||| |||||| || ||| |||| || ||||| || || Sbjct 793 ATACCTTCTTTATCCTGAATCTTTGCT-TTCACATTTTCAATCGTATCAGATGGCTCGAC 851 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||||||| ||||| || ||||| |||||||| ||||| || ||||| Sbjct 852 TTCTAAGGTGATGGTCTTTCCTGTGAGAGTTTTGACAAAGATCTGCAT 899 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| | | | |||| ||| || || || ||||| || || || || || Sbjct 899 TGCCACCTCTGAGGCGAAGGACTAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTG 958 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| | | | ||||| |||||||| |||||| | ||||| | ||||| || | Sbjct 959 AAAGAGTACGACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGAG 1018 Query 15255 GAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 | ||||| || || || || || ||| || ||| |||| |||||||| ||| Sbjct 1019 GGATTCCCTCCTTATCCTGTATCTTAGCT-TTAACATTTTCAATGGTATCAGAGGGTTCC 1077 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || |||||||||||||| || || || |||||||| |||||| Sbjct 1078 ACTTCTAAAGTGATGGTTTTACCTGTGAGTGTCTTCACAAAAATCTGCATA 1128 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || |||||||||||||| || ||| |||| | || || | || Sbjct 12 ATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCCTCAAGCTG 71 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || || | ||||| | || || || ||| |||||||||||||| || || Sbjct 72 TTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 131 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| ||| | || || || || | ||||| || |||||||| || || || || Sbjct 132 GGCCTTCACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGTCTTGCCAGT 191 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 || ||||||||||| || |||||| Sbjct 192 AAGTGTTTTTACAAAGATCTGCATA 216 >seq1688 Length=171348 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233 |||| || || || || || |||| |||| | ||||| |||||||| ||||| | | Sbjct 124680 CTTTCTGAATATTATAGTCAGATAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 124621 Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293 | || | || ||||| ||||||||||| || || ||| || ||| ||| ||| Sbjct 124620 TTAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTTT 124561 Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353 | ||||| || | ||||| || | |||||| || ||||| || || ||||| |||| Sbjct 124560 CGATGGTGTCTGAAGGCTCTACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACAA 124501 Query 15354 AAATTTGCATATTTG 15368 |||| |||||||||| Sbjct 124500 AAATCTGCATATTTG 124486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362103181075902