Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq684 89.7 4e-13 >seq684 Length=498857 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || || || ||||||||||| || || | || ||| | | || || | |||||||| Sbjct 348934 GTGGATTCTTTTTGAATATTATAGTCAGACAAGGTTCGGCCATCTTCTAATTGTTTACCT 348875 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | || || ||||||||||| || | || ||||| || |||||| ||| Sbjct 348874 GCAAAGATTAGCCTCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAATTTTTGCTTTC 348815 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | |||||| ||||| ||| | ||| ||||| || ||||||| |||| Sbjct 348814 ACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTGATGGTCTTTCCTGTTAGAGTT 348755 Query 19025 TTGACAAAAATTTGCAT 19041 || |||||||| ||||| Sbjct 348754 TTCACAAAAATCTGCAT 348738 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || ||||||||||| || ||||| || | | ||| | | ||||| ||||||||||| Sbjct 349618 GTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCCTCAAGCTGTTTACCT 349559 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | || || ||||||||||| || | || ||||| || |||||| || Sbjct 349558 GCAAAGATTAGCCTCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTG 349499 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | ||||| ||||| || | ||||||||| || ||||| | |||| Sbjct 349498 ACATTTTCAATCGTATCTGATGGCTCAACCTCCAAGGTAATGGTCTTGCCTGTGAGAGTT 349439 Query 19025 TTGACAAAAATTTGCAT 19041 || ||||| || ||||| Sbjct 349438 TTAACAAAGATCTGCAT 349422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414485784019468