Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1570 113 5e-20 >seq1570 Length=204615 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 ||| ||||| ||| |||||||||| | | |||| ||||| || || ||||| || Sbjct 66159 AGGTTGTAACCATGTAAAAGGAATCCTTCTTTATGGTCCTCCCGGAACTGGAAAAACCTT 66100 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGG 164618 ||||||| || || | ||| | |||||| | || || ||||||||||||||| Sbjct 66099 AATGGCTAGACAAATAGG-CAAAATGTTAAATGCAAGAGAACC--TAAAATTGTTAATGG 66043 Query 164619 TCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || || ||||| | ||||||||||| || |||||||||||| |||||| | | ||| Sbjct 66042 CCCCCAAATATTGGATAAATATGTAGGAGAATCAGAAGCTAATATTAGAAGGCTCTTTGC 65983 Query 164679 GGAGGCTGAAGAAGAACAAAAGAA 164702 || || ||||| ||| | ||||| Sbjct 65982 AGATGCCGAAGAGGAATATAAGAA 65959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595743723655200